Detailed information of XP_066936498.1 in Clytia hemisphaerica

Genomic Location: NW_027104602.1:446469...476439
NR annotation: XP_047136678.1, PMS1 protein homolog 1 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54277PMS1 protein homolog 1 OS=Homo sapiens OX=9606 GN=PMS1 PE=1 SV=1
P74925DNA mismatch repair protein MutL OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=mutL PE=3 SV=1
B9K7B8DNA mismatch repair protein MutL OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=mutL PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01119DNA_mis_repairDNA mismatch repair protein, C-terminal domainFamilyInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR013507DomainDNA mismatch repair protein, S5 domain 2-likeInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR038973FamilyDNA mismatch repair protein MutL/Mlh/Pms-likeInterproscan
IPR014762Conserved_siteDNA mismatch repair, conserved siteInterproscan
IPR002099FamilyDNA mismatch repair protein MutL/Mlh/PMSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0032300Cellular Componentmismatch repair complexInterproscan
GO:0032389Cellular ComponentMutLalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10864PMS1; DNA mismatch repair protein PMS1-DNA repair and recombination proteinsko03400deepkoala

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