Gene detail

Detailed information of XP_068669876.1 in Montipora foliosa

Genomic Location: chr8:28953198...28975926
NR annotation: XP_029181000.1, solute carrier family 49 member 4-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068813775.1

GCAATCATTTTTGCAATGGAGGACACCAAGACCGATAGCGAAAGGACCTGTCTCATATCAGACGAACACAATCCTGACAAAACCGTTTCCGAAGGAAATAGTAGTTTGCGATCTGTGCAATGCAAAGTTTACAAGAGACGGTGGTATATCCTCTTTGTTTTCAGTCTAACTTCGATTGTGTCAAATTTGATGTGGAATACCTGGGGTCCCATTCAACGGCCCTGTCGTGTTGTGTTTGGATGGGAAAGATGGACAATTTTACTCTTATCGTCGTTGGGAGCGACTGGACCTCTATTGGGGGCCGTGCCTTCGACTTGGCTGATGGATTCGAAAGCAATGTTGCCAAGCTTTATCGCAAACGGGGGGCCTCCACTGGTGTCAAGTATTTGGTTTCCCCCAGATGAACGGATAACTGCTACAGCTATTGGAACACTGGCTGCCAATGTTGGGTGTGCACTTGCATTTCTTATTGGACCAGAAATGATGCCGAAAACATTTGAGAGTTCAGATCATGTGAAATTGAATTTCACACACAAACAACTTCATCTGCTTGAAACCAAGATTATACATTACTTCTATGTGCAGATTGGCCTATCagcatttcttttcctttgtgtcATTATTTACTTCCCATCAAAACCACCTCTTCCCCCAAGCATTGCTGCCATGAAGAAAAGAACCACAGAAACTGGTTACAAACAAGGGTTTGGAATGCTGTGGAACAATACTTCTTACTGGTTGCTTATTTTAGGATATTCTCTGTCATTTGGAATTTACTTTGGTTGGACATCAGTTTTGGATGTTGCTGTTGAGCCCTTTAATGTAGATGAGAAGACttcaggttggcttggaactgCTGGCAGTTTGGCTGGAACTCTTTCAGGTGTACTTATCGCAAGGTCAGCTGACACTGTGAAGCATTGGACCAAACATATTTTAGTCGCCCTCTTCATTGGCACAGTAATGATGCTGCTACTTTTCAGCATGACTTGTTCAAGGATCTTGCCATTCTCCaaagaaattttgtttggaTCTATTATTATAATTGGCCTATTATTTAATGGAACTTTTGCTCTTTTCTTTGAGTTGATTATGGAGTGTGTATATCCTGTTGGGGAGGGGACATCAGTTGGTGTTGGGCTTATATTAGGGAATTTTGTGATTCTGTTGTTTGATGTTACTTTCATGTTTCCTACATCGGATGTGCGCTGGATAAACTGGGTGTGTGCAGGCGGCCTTGGTATTTGTATCCCATTACTGTTACTCTACAAAAGCCAGTATCGACGACTTGGTCTTGATTCTGAGAATGATCaataatttcaaaatgatcattaaTTTGAAAGTCAGGGTgacacaaaattaataatattaatttttaggCCTGCTTCTGATACTTCACACAAGCCGAATcaaattcattgaattaagttcatgtgaagtacggcgtctgaatcaattcagaacGACCGGTCTAATTCGGATCAGCTAAGCAATTTTCCTGCCTGGCTTAGCCAGGAATTACGGCTGTGGAGCGGCTTTGAtgcagacgccgtacttcacatgagccaaATCAAATGCAGAAGTTATTAAAACTTTGCAATTTTCGTCAGTCATGGTATGCTTTTGTGAATTAAGTTCGGCATCTGAATCAATTCAGCCAGGTCTAAATTCGCATTTGATTCAGCTCAGGTGAAGTACAGCGTCTGAACTGGGCCTTACGTCTTCTATACATCACAAAATTTGTATTCTAACTTGACTTTTCCTTCATCTTCCTGTGGTCACAGTTATGTTCATTATATGACTTAATAGAAACAAGTAAAATTGTAACAATTTTTAAATAAGACATTAATCAATTTTTTCTAATGTGAAGCTGGCCTGATTTGCACCTGGTTTCAAGTAATTAAATAGTGACAGGCCATTCACAGATCCCGCAAACGTGTCGCATGAATGTAATTGCTTCTCTACATGTGGCGTTAAAGAGATTAACTACAGTTTGGCTTTAACCAGTATATCTCTCAATGAACTGCCTCTTTTATAAGAAATGATCGGAGGTTCCCTGaacatttctttaagtttaGGTTGCAATTCTATAAGATGCCATTTCTGCATTAGAATGTGTTTTACATGTAGGTTAGGCACAGATGGGTTGTATTGCGTTACAAAGGGCAATATTTCTTTGCGCACTCTTGTGTTTTCTTGGAGAGCTTTCTTTCTGTCAGAGAATTTGACTTCCGAGAGTGTTTTATCTATAAGGTTGTTTGGGTAGCCCCTCGCTCGAAGGCGTAGTTTGAACATTCTTATGTTTTCTACGAAAGTCTCCTGTGAAGAGTTAGTTCTTAGTAGTCTCAGGCCTTCACCTTTCACGAAGCCTTTTTTGACTCCGGGTGGGTGACAGGATTTAAAATGCGTGTACTGGAATGTCTCAGTAAGCTTGACATAAGTACGTGATGTGGCCAAGATGGACGGACGTGTGTTTGAGTGCTCTGCGTAATATCTTCCACCTTTCGTAAATTTTTGATGTTTAATTGTTTCGTCCACTTTTATCTATTTGTTTCGGTCTCTTGTTTCGTGTGTCACATTATGCCTGAGTCTATTGTCAACCTAACGAAAGAAAATAACGATCTTAAATCTAAAGTTTCTGCATTATCGGAGG

Protein

Uniprot

Uniprot term	Description
Q501I9	Solute carrier family 49 member 4 homolog OS=Xenopus tropicalis OX=8364 GN=slc49a4 PE=2 SV=1
Q6GNV7	Solute carrier family 49 member 4 homolog OS=Xenopus laevis OX=8355 GN=slc49a4 PE=2 SV=1
Q9N1F2	Choline/ethanolamine transporter FLVCR1 OS=Felis catus OX=9685 GN=FLVCR1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049680	Family	Solute carrier family 49-like	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10924	MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051184	Molecular Function	obsolete cofactor transmembrane transporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15381	DIRC2, SLC49A3; MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2	-	Transporters	ko02000	deepkoala