Gene detail

Detailed information of XP_068671584.1 in Montipora foliosa

Genomic Location: chr8:43597670...43612862
NR annotation: CAH3173809.1, unnamed protein product [Porites evermanni]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068815483.1

CAAACGACATGGCGGCGCACATGTTCGCTGTTGCCATTGctcattttctcctttcttGTATCTTATGTGCTGTGGCGAAGCATGGATGCGAAAATATCTCTATATCAAAGCTACCAGTACCAAGCCGCGATTATTCAAAGAGACCCGTCTGTGTGCAAGTTGTGAGGCTCTGAATCCAGCCAATCGCACTTGGGCATCAGCAGTCCAGTCTATGGTGGTCAGCAGCAATGATTTAGATCACATGATATTTAGACTTTCCCCATTCAAGACATCATGCTTTGCAGTTAATGGGCTAGCACATGATGCAACATGGTCTGCAGAGTTTCTAGCAATAGACTGGCAATTTCCAGCAACTTTTTTTGCTGGCCTCATCATCTTTTACAATGCTGAGAGACTCAGTAGGAATAGTTTGTTCTTTTATTCGTCTGGCGTGTCACTCGGTCTCATCATGTCGCTGCTGTTGGTGGTCTACATTCTTCACAGGCTAGTTCCTGGGagaGGAGGTGCCTATGCAGTTCTGTTGGGAGGTTGCAGTGTTGGACTTTACTTGATACAGTGGACAATTGGAAATTTAAAAGACCTTTTATTAAACCATAATCAGTGGGTTATTGGATATTTTGTTATCGTAGGTGCGATTAGCTTCTGCGTCTGTTATTATTATGGCCCAGTGACAAGTGATCGTGGTCTGGACCTTATAAGATGGATGTTACAGTCTGTTGGACTGTTGCTGCTCTACATGGGCACTCGATCAGACGAAGTATCTATTGCTCTGGTGGTCATCGTTTTTCTTTCGCATAAAATTCGCAGCAGTGGGATTCTATTGCACTTCGTGAGACTGCTTCCTCATAAGTGGGTTTCCTATCGAGTGTATTACTTTTTCTTTCCtccaaaacacaagtttttATCTGAAGAGGAATATATTGTACAGGGATCTGAAGAAACAAGATTGGCTTTGCAAGATCTTAGGGAATATTGTAACAGTCCTGAATGTAATGCTTGGCGCACCATTAGTCGGCTAAAAAATCCTACCAGATTTGCAAAGTTTGTATCCACTGGGCAACACTATTTAGAAGAAGAAGTGAATTCATACGAAGACGACCCCTCCCCTTGGCTCACGTCGGATGAAGATGAGGAGAATCATTCGATTGACGGCTGATTATTATATCTTTATCATTTCTTATCATGAAATGACGCCTCATTTGTATGGGACAGGACTGCCTTCGGAATTTTCATCTAAGCCGTCAGCCTGCAAACGCACGTCATCAAAAAGCGGCCCTCCAATCGTTTGTTACCACACAATTATCCGTAAGCTTTTAAGcttttggtatccaaagagcGTCTTCAACAAAGACCCTTCGAATGTATCCAAGTACCAATCCAAACAGGACCATAGTACGGGAAAGGTGGCTTTTTTTATTAAACACAGAGACTTGTCAAAACGATCACTGGTTTGCCCAATAACCGAAATCTTCGTTCTACACAAGCCGACAAGGGTTTATCCGCGCCTTAGCCGAACCCCTAGATCACCCAATCTCTCGATGCCCCATCCCTCTCAATGTACATACAGTTATCTCCCCACCCCTTCCGCAGTGAGGAAATCAAAGATTATACGAACTGGTTTCCAGAGTGACCGAAGAGCAGGGTCAATTTGAGAACGGCAATGGAAgaatttgaaattatttttagaaAGTTTAGTGCAATACAAAGTTAATagtaattgtaattgtttttGCATTAATGCATGCGATGTTTTTTTACTTCGTACGTATAATAGTAGCGGTTTATTATTCGAGTTGAATAAAActatttgtaatttcacttcaaaatattgtttttggaaCAGTCTAGTAACCGTCTTTTTTAGATACCACGCTTTGACCATAATCTTCTTTGATGCtctattttaataacaattagGTGTTctgtttgattttgtttgtttgtctcccAAAACGTTTTGGAAAAAACTTCGGGAACCGTTTCAGAAGTTGCTATTGGGGCCAAGCAACTGCGCAGAAATGCGTACGGAATTATGTACACTCAACTGGAACAGAATTTGCACCGGCTCCGTGTTCCAGACCCGTGTGAACGGGGTTTGAGTATTATTGCTCACGTTGCGCTCTGATTGCTCTAGGATGGCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RDB4	Nuclear envelope integral membrane protein 1 OS=Pongo abelii OX=9601 GN=NEMP1 PE=2 SV=1
O14524	Nuclear envelope integral membrane protein 1 OS=Homo sapiens OX=9606 GN=NEMP1 PE=1 SV=2
Q6ZQE4	Nuclear envelope integral membrane protein 1 OS=Mus musculus OX=10090 GN=Nemp1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003829 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10225 all species →	NEMP	NEMP family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019358 all species →	Family	NEMP family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13598 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27355	NEMP, TMEM194; nuclear envelope integral membrane protein	-	Structural proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.