Gene detail

Detailed information of XP_068671776.1 in Montipora foliosa

Genomic Location: chr9:5849047...5859366
NR annotation: XP_029191655.2, disheveled-associated activator of morphogenesis 1-A-like [Acropora millepora]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068815675.1

CGAGTTGAAGACCAGGATACAAGCCATTTGGCATGAAtgaggacaaaataaaaagggACAGCGATTCAAACAAACAAGAAATCATTGGAAATCACTGGCGTTTTACAAAACTTACTTCAGAATTCTTTAAATGttcaattCAGTATTGCACGAGTGCAAACCGGAAAACACCAACTGGAAATTAATTGTGCCCTTCGCTGTTGTGACTCTCCTCTGTTCTGCGGTGTTCTTTACAAATAAAGATATCACTTTTGCTGTCAACATCTGGGTCTTCCCTGGTTTCGCTGTCCTTATTGCGTCCTTTGTTTGCTCCGACGAACTTCATAAATGGATCAGCACCAGGCCTCAAGACCTTGGTCAATGTCTATCTGATCTAACAATTTCGGCATCTTCGCCTCCCCCGCCGTGTGCTCCTCCCCCACCTCCAACGTTCTCCCCACCCCCTCCTCCCCCAAATACAATGAACGCACACAAACGTCGCAGGATAGACTGCCGAAAATTGTCCTGGGAAACACTCAGCCCAGATCTTCTCAACCAAGAAACGATTTGGAAAAAGGTGAAGAAACTCTATCCTTTGGAGGACATTTTTGACCCTGAAGATATCTTGAAGGAATTTTCGATTTTGCCATCTCAAGGAGTGTCGATAAAAGCCAAACGAGAAAATGCTATGAATGAGAAAAAGATTTTTAATATCTCAATCGTGATGACTCATTACAAGCTGAAAACAGAGCAAGTATCAAAATGCCTTGTATCAGGGACTTCTGATTTGACATCAGATGTTCTTCGGCAACTTCTGGCATTTGCACCTGACGATCGAGAGGCGAGAGCTATTAGAAAACAGGAAAGAGAAGACGAATCCTTACTGGAACCCGCTGAACGCCTGTATCTTGAGATAGCAGCGTCCGTTCCAACGTACAGAGAAAGACTACGAACAGTGTTACTGAAAGCTCAATTTGAAGAAAGGATCGCCCTAATAAAACCACACCTGGAAACTGTAATAATGGCTTGTCAGGAGCTCCTTACCAGCGAAAAACTCACGATATTTATTGAGTTACTCTTGACAATGGGCAATATCATGAACAACAGCAACGCCAGTGCTTTCAAGATAACATTTGTCACTAAGCTTATGGACTACAAATCAAGCGTCAACAAAACAACTTCAGTTCTGGATTACTTGACGCGAGTAATTATCAAAAAGTGTCCGCACATCGCGGCATTGGAGGACGATCTCAAACACGTAAAAGACGCTTCAAGAGTTCCGTTAAAGACATTGGACAAGGAGATCAGCAAGCTAACTTCAGAAATTGAGGTCCTCGAACAAGACGTCGAGAAAATAAATAGAGAATATTCCATAGAAGAAGATGTGTTCCAAGCAAGCATTGAActgtttgcagtgactgCTGAGGAAGAGCTTAAAGATGTGTTGGCGCTGCGCAAAACcgttgaaagaaaatttcatctttTAGTGCGATACTTCGGAGAGGGATCAATTAAACCAGAAGAATTGTTTGACATTTTTACATTGCTCTTGCGACAGTTTCAGGATGTCTTGAAGTCTTACAAGTGAGAGAGAGAAAAATTTGCAAACCAAATAACTTCCCACCATCAAGTAAATATTTACTATTTATTAGTTAATTTTTGGTTGAGAAGTATCCGAAAAGTGTTTGAACCACCAAGACAAACGAGTTGGTCGTGAAAATACCAGTACAAGAGGCTGATTCATACGAATATATCATATTTATTTGGTataagttacatgtatttaaaaCTGTTTGACTTATCCGACACTTGTATTTGTAACCAACTTTTCGGGAAAATTGTTGGGATTAATaacttgtaaatatttttttttttgtgtgtcaTTAAAACGTCAAACACCGAATAAAATGCACAACTACATATtagaaaaattgtagttaaagCTGAAAGTACATTTGCAATTGATCTTTACGGCTTGCCTGCAGCCAGGAATAGATGGATGCATGACTTTGTAGGTGATGACATTGTGACTGTTGTGTCCCATGGAAATGACGGCATTTAGGAACAGCAAAGTCAATCTTGACACAAATGTCACATTAAGGTATAAGGGCCTGGGTCCCACTTATGCAGGAACCCTTAATTTcggccactttcgatatactaaaattcagcttgaaagagaggtttagattGCAAAGACGAAGAAAAGTGGttatgctaatatctttcacattcattgcaacttttttctattgtttttgtcctctctgcctcactatcaagctgaatattgatgtTTCCCcactcctcaaaaaaccaacatttgacttgatttactttgattcattgttcatttcagtttacagtgtccccaattagcgttccagcgctagaacgactagccacttaaataaagttcctttcctctcctttttttaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54WH2	Formin-A OS=Dictyostelium discoideum OX=44689 GN=forA PE=1 SV=1
Q0GNC1	Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009542 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR051412 all species →	Family	Formin Homology Diaphanous subfamily	Interproscan
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45691 all species →	PROTEIN DIAPHANOUS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0030041 all species →	Biological Process	actin filament polymerization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14001	SIL1, SLS1; nucleotide exchange factor SIL1	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.