Gene detail

Detailed information of XP_068673057.1 in Montipora foliosa

Genomic Location: chr9:18005013...18010969
NR annotation: XP_027056414.1, uncharacterized protein LOC113683378 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068816956.1

tccaacgtcactggcttcatagctcagttggttagagcgtcgcaccggaatcgcgaggtcacgggttcaaaccccgttgaagtcctgaatttttcaggcttctctacgcaattgtaaaaattgcgttcataactgcgaagatcatagctttacttgatttcatatccgcagttcatatatgattcatttcatataccattcatcattgattcattcctcacgggaccattagagcccacaaatgaccagcttccaacgtcagtggcttcatagctcagttggttagagcgtcgcaccggaatcgcgaggtcacgggttcaaaccccgttgaagtcctgaatttttcaggcttctctacgcaattgtaaaaattgcgttcataactgcgaagatcatagctttacttgatttcatatccgcagttcatatatgattcatttcatataccatttcatcattgattcattcctcacgggatcattagaacccacaaatgaccagctcccaacgtcagtggcttcatagctcagttggttagagcgtcgcaccggaatcgcgaggtcacgggttcaaaccccgttgaagtcctgaatttttcaggcttctctacgcaattgtaaaaattgcgttcataactgcgaagatcatagctttacttaattTTACTTCAATTCACTACCCTGCACGGCCCGCAGTCTCGAAGGAAGCTACAAGAAAAgcAAAGCCGAGTCATGAATTTGACAATTAGCTTTCTCGCTCTGCTGCTGCTTGTTGTCTGCCAAAACTGCGAAGGAGCTCGAGGTTGGTCGGACCTGGAAGTAAACGTAACTCAGAGATCGTTGAAGACAAAAGCGTTTCCGAAGTTGAAATGTACCTGCAAAACAGCAACATACAGATCGTGCACACTGCAAGATTACATATACAAACACAAGTGTTTTCCACCAAAGTGGAAGACCTTCTTCGGTGGCGCTGGAGTGCCCCAAGCTATAAGTAAGATTTCACTCAAACTCGCCGATATTTTAAAGGGGAAAGGTACGCACATTGAACCACCCCTGAAACTCATATTTCAGGCCCTCAAAATGGTGTCACCCGATAAAATAAAGGCAGTGATTCTCGGCCAAGACCCTACCCCCCAAGCGGGCCAAGCAACGGGAGTAGCCTTCAGTGTTGATGGTGATGCCCGTGAGGTGCCTGCAGTCCTAAATGTGCTACTAGAGGTGGCCTTAGAGGGATGGAAAGTGAACGTTACAGATGGTGACCTGACAGACTGGACAAATGAAGGAGTGCTTCTTTTAAATACCGCCTTGACAATAACGCAGGGAACAGTAGGCTCCCATCTGCCAATTTGGAGGAAATTTACGAAGTTACTCATCAAGTATATCAGCGACAATGCCCAACCTTCTGCTTGGATGCTATGGGGGTATGAAGCGAATTCCATCTCGATAAGTCGCGGAGTCTCGTTAATTAATACAACCAGACACAAGATCTTGAAGGGACAGCATCCATCTCCCAGAAGTGTGACAACCACTGGTTTCAATGGATTCTTTGCTGGTGGCTATTTTAAATGTGCAAACGAGTTTTTAGCTGCAAAAGGAAGAGGCGAAATTGATTGGGATCTGACAAGTGAGACATTCTTGGAGCCCTGTCCCGCATAACGGTTACAGTATATATATCCAAACGATGTATAAATATTATGTCCTATGCTCccgttactgagtggtatatttcttaggtcgcccctctagatactaaccccgccggacaggttATAAGTTCAGCTTTAAACgtttgtttacaaaactgtcaggTGCTGTCAGTGCAcacttacacttgtggtggaaaaaagttgcatgatcaacatgtcagcccagaagccaatgtttctcgattcccttttatttcttcaatctctctgggttcagtactttcagtagtaaccacatgtcttctcaaggggctatttatctaagacttctaccatggcgctacaatgatagacaataccaaaacaatatcgtgtactgttagacctagatattacgcaaggacaactgtcaacatgtcatcccagaagacaatgtttttcacttcctatttattttcttcaatctttctgggttcagtactttgctagtaaccacatgtcttctcaggctatttacccaagacttctaccatggcactacaatgatagacaataccaaaacaatatcgtgcattgttagagctacatattacgcaaggacaacttggaataaatcgctgtgttactaccacacgtaagcaatgcgtgtcaagaggacaggaatttcttctttctgacaaatgattaattaataggccggtagccag

Protein

Uniprot

Uniprot term	Description
A7ZAZ4	Uracil-DNA glycosylase OS=Campylobacter concisus (strain 13826) OX=360104 GN=ung PE=3 SV=1
C1DQR0	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1
Q88N05	Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=ung PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03167	UDG	Uracil DNA glycosylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005122	Domain	Uracil-DNA glycosylase-like	Interproscan
IPR002043	Family	Uracil-DNA glycosylase family 1	Interproscan
IPR036895	Homologous_superfamily	Uracil-DNA glycosylase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11264	URACIL-DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004844	Molecular Function	uracil DNA N-glycosylase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0097510	Biological Process	base-excision repair, AP site formation via deaminated base removal	Interproscan