Detailed information of XP_068675234.1 in Montipora foliosa

Genomic Location: chr10:2122430...2180160
NR annotation: XP_044180589.1, LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G3MZY8DNA-directed RNA polymerase II subunit RPB1 OS=Bos taurus OX=9913 GN=POLR2A PE=1 SV=2
P11414DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2
P24928DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF04992RNA_pol_Rpb1_6RNA polymerase Rpb1, domain 6DomainInterproscan
PF04990RNA_pol_Rpb1_7RNA polymerase Rpb1, domain 7DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR038593Homologous_superfamilyRNA polymerase Rpb1, domain 7 superfamilyInterproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR007075DomainRNA polymerase Rpb1, domain 6Interproscan
IPR007073DomainRNA polymerase Rpb1, domain 7Interproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan

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