Gene detail

Detailed information of XP_068676058.1 in Montipora foliosa

Genomic Location: chr10:7838786...7850544
NR annotation: XP_029184673.2, acid sphingomyelinase-like phosphodiesterase 3a [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068819957.1

ATACAGGGGGTGTCCAATATCAATTTCCTCGTTGGAGGTTTAGCAATTATATTTTCTGTTCCTGTGAAAGAGATCCTCTTTCCCAATCCGGCTCAAGCATCCAATCCTAATCACATGCGTTTACTGCTCCCACAATCATATTCCCTTATTGaaAGCTGTAAATTGTTATGACTTCTGCATAGTCATAAACACCAGGAAGATGGAGTACAAGTCCGACTCTCAATGTCAGGAAGACCGATTGAGCATTGAACACAGGCAATGGAAGAAGAAAACTTTACAGGGGACCTATCAGGCCATCAAATGTGGACAAGCTATGCTGGACCAGAAAAAGTATTGGAAAATATTGCTACTGTTAGTAGCAAGATACACTCCAGATTTCCAAAGATTCCTGTATTTCCATTAATTGGTAATAATGATCTTCCAGGACATTATGTTTTACCAAACTCAACCAGTGATTGGTACCAGAAACTTTTGTCTTACTGGCACCCACTTATTTTGTGTTCTGGGTGCCCCAGTTATGTACAAAACACCAGGAGTGAGCAGGTTTTGAACAGGACTTTTTTGGAAGGTGGATACTACAACACTACCATTGCAGGTGGTAAAATTGTCCTGTTGGTTTTGAACAGTCTTTACTGGTCTGTAACAGTTGAAAGAAGAGTTGAAACTGATCAGAAAGCTTCAAAGCAGTTGGTTTGGTTAGAGGAGCAATTATTGCTTGCCAGAAACCAAGGACAGAAGGCCATAGTTGCCAGTCACATACCAGCAGGAGTTGACTCATATTCTTCAAACCCATTTTGGTTCAGTAACTACACAGATGACTTTGTGAGGATTGTTGCCCAAAACTATAGTGATCTTGTTATTGGTCAATTCTTTGCTCACACTCATAAAGATGATTATCGTCTCCAAACGCTTTCGTCAGACATTACCTTTAACCAGCGTGACCCTTCAAAGTCATTTGTACTTTTAGCACCTGCTATTTCACCTGTTTACCACAACAATCCAGCATTTAGGTTGTTTTCCTTAGACACAGAAATATTGGCCCTGACCGATTTCACTCAGTATTTCATGGATCTTGTAATGGCTACAGAATTCTCCAGTCCTGTATGGCAATTAGATTATACATTCAGCAAGAAATATCCATCAAACAACACATTTATTGATGCAGAAAGAATCAACAAACTTAACCAGCAGTTACTGAGCCAAACAAGTAACAAAGTCTGGAAAGGTTATGTGTTTTCAAGGGAAACGAACTACCAGCCAATGCCATATAACAGGTTCACTCTGTACTGTGCTATGAGATTTGTCCATTTTCAAAACTTCCATGTATGTATTAAGAAGTACAATGTACCAGGTGGGTAATCTCATCCCAACCAGAAGCAGAAATGATCTTCGATAATGAAACATGTAACATGCAGTCCATTATTTTTTATTCTGAAAAGgggcatttttaaaaataatgtatGCTGCAGCTAAAGTTCTAGTAAGAAAATgtgtcatttctttttacaagCACACAATaagttaaataattattgttttgtaaatTCAAAGGTAGTCAGTATGTTAGTTTGAGCTTTTCAATAGACCAGCAGGGTTTCAATAAGAGCAGGGCCCAGCGAAATTCACCGGCTATTGCGTGTGAACTCACAGGCTCCTTTTCCTTGGAAATTACCCCAACCTTTACGAATAAAATGAGAAACATTCGCACAGAAGACGAGCCTTGGATCAGAAAAGATTTGTTGATGAGAAACAAAAGAGACGCCTCAATTCTGAGTAACAGTGATCAAGGATCGAGCACACATGTTTACAAGGCAGTGGTCCGGCGGTCCATTACTTGGTGTAAGCTGCCTGATTTCCTAACTACATTTGAAGCGTGACAAGGCGACAGAATGTCTTTTCGGTCACAACAGATGACATACATTCTATATACCCAGCTGTACAGAATGCAAAAGAGCGTTAAAAAGGGGTCTGTGTCACGCTCAGTTTTTGCATCTTTTCAAAACGTAAAATATATCTTGCCatcaaatttaattatttcaaaaatttagAGTATTAATGTATTCTCTTAAAAAAGAGTCAAAATTGAATGATATCAATGTTGTGTTCGAATACCCAGTAATGCAAGAAAATGCATTTTAAGAGacccaaatttcaaaattttcccagGGGAGGATGACCCTGGACATCGGAAAGCACACCTTTCATGGTGTGCATTGTCCATTTGTCGCCTACTCATCGAACTACTGATCTGGTTTTGTCGCCTGCTAaaattcttattgaaaaccctggaCCAGTGTAAATGCACTGTAATCTAGCCCTAAAAAGGTGCAACCCAATGACCTTTCAGAGTTTTAATTTGAACTAAATAGAGCTGAATTAACTATGATAGATGGTATGCACATCTAGGAAGGACCAATTTTGTAactatatattatataattatgatGGTAAACATAGTAAGTTGATAGCGTTAAGCTTGGCAAGCAGGTTATGTAAGGTCTCAATGTCATTTCATCTAAAGCAGTAATTTGGAAATGCCAATGGTTGGATTTTGTTTGTAAATTAAGCTTATGTGGCTCAAGGGGaccatttttttaatgtcagGTGCCTTTGTAATGGACTTTATCAcataatttacatgtatgttactATAAATTTGTTAGAAatagtttttcagttttttcaatGAAGGTATCTAAAGTAAATGCATGCAGGGAAGTGCCTCACAATGTTCATGGACATTTATCACTGTTATGTTTATTAATGATAGGTAATTTTGTTATCTTCTGATTTCTAATAAAGTTGTTGAAAAAAT

Protein

Uniprot

Uniprot term	Description
Q54C16	Sphingomyelin phosphodiesterase B OS=Dictyostelium discoideum OX=44689 GN=sgmB PE=3 SV=1
Q55C09	Sphingomyelin phosphodiesterase A OS=Dictyostelium discoideum OX=44689 GN=sgmA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19272	ASMase_C	Acid sphingomyelin phosphodiesterase C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045473	Domain	Sphingomyelin phosphodiesterase, C-terminal domain	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10340	SPHINGOMYELIN PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01128	SMPDL3; sphingomyelin phosphodiesterase acid-like 3	EC:3.1.4.-	Enzymes with EC numbers	-	deepkoala