Gene detail

Detailed information of XP_068676310.1 in Montipora foliosa

Genomic Location: chr10:13981782...13986808
NR annotation: XP_020615176.1, uncharacterized protein LOC110053300 [Orbicella faveolata]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068820209.1

CATTGTATCTCATCATTGTAACGAGGTTGACAAAATGGCCGAGCCGATGGAAGACGATGATTTCCCTGCTGATCTTCCCAAATTCAACCGCTACAGCTATGCTATGGTAAACCAATGCCAGAGAAAGCTTTTGCCCATTCAACTGGAAGCTCTTGAAAGTCTTCGGCGTTGGTTCGACTTCCATAGTCAAGACGGGCAAATTGCATTGGTGTGGATGCCCACGGGTAGTGGAAAGACGGGCATTATATGTTGTCTTCCATACTTTCTAGGAACAGAAGGACTGCAATATGTGCCTGGTAACTTTCCTATTGGACGCCCACGTCATTCCTTCGACAAACCAGTACTTATAATTTCACCCAATCTGAATATTAGCGATCATCTTCAAGAGCAGATGCTGAGATCTCACCTGCCTGGATCACAAAAGAACTTTTTCTTGCGTTATGGGATTGTCAATGAGGAACAAGCGCTGCGAGCGCTACCAGAAGGAAAGAAGATAGAGAGTGCAGCTGAGTTGAACAGTCCTTACTACTTGAAAGGAAACGAGGTCATTATTGCCAATGCCCAAAAGTTTCTCAAAGAGGAAACATGGGAAGCATGTCTACCAAATGACATGTTCAAACTTGTGATCGTCGATGAGGCACATCACCACCCGGCCAGGACGTGGAAAAGGATCATCGCTAAATTTCGTGGTCATTCTTTGGTTGTATTTTTCACGGCAACACCTTACAGAGGTGACAAGAAGCTAGTGGTTCAACCACCATTTGCGTATGAGTTGCGTCTTGCACGTGCCATACGTGACAGAATAATTCGCAAGACGAAATTTGTCGAAGTAACCGGGCAACCTCGTGGAGTTATTAAATTTCGAACAGAAGATCCGGAAGATCGCCAGAAGTGCCACATTTTTTTAACCATCCTTGAAAAAGTGAGAGAAATACAAGAAGCAAAGGACCGGGAGACGCCGCTTCCAAACAACATCCCTCACATGGCTTTTGCCATAGCTAAGGACCAAGTCCATGCGAATCTAGTAGCGGAAGTTTGGAATGCTTCTTGGAAAGATGCTCCTGTCATCACATACACTTCAGAGACGAAAAGCGACTTGCCAGAGAAATTGCTTAAAATTCGAACCAATCAAGTGAGGCTTGTTGTGGTTGTGGATATGCTCCAAGAGGGATTTGACCACCCACCGGTTAGCATCTGTGCCATAATGACAAATATTGGTTCCCCAGTGAAGTTTGTACAGTTCATAGGGAGAGGGCAACGAATTGTACGTGATTCTCAAGGTAACCTAGAGAGTGACACTATTAATGCTCATATTGTAACACATCAAAATTTCCAGCAAGCGGAAAATTATGATAAGTTTTGCAAAGATGAACTTTTATTTGTTAATGACTAGAGCTCAGATCCCTGGAAGTTACTTACCGCGTAAACCCGGCTTCAGTATCATACCCTGCAAGACAGAGATTCCCTTCCCTTTCTCCTCGGAGAGCAGTCACGACCGCTTGATTTCTGTCAAGAAACATGTCAAGATGTTGGGTGTGACTGATGTGTCTTGCTTGTGCCTCTGAAATGTTTCTTACACCATCAAATTTGTAGCCATTTTCGGTTCATATGTGACCACGTAATTAGATTAGATTCCATGTCATTGCACTGTTACCATATTCAGGGTAGCGGATATTTTCTGTAATCTTGAAAACAGTCAGCGGTTTTTAATCTTATCCATCATACATAATTTATAAACTGGTTAAAACTTGTGAAAAACTCGTATGTTGAATTTGCTCATCCCTGGTCATGGAAAGTGGCTAATCAAACTAGTCTGTCAGGAGTGGAACTTCCCTATTTTTCTCTCACTGAACAGAAATGGAAGGAAATCCCAACTTTCTTGTATGGTACAATACTACTTGTAAGTGTTTAAGGGATAGTTTCACAGTTTGATGCTAATTGATCAAGTAAGGTAAAGGTGCAGTCTGTATAGTTATGAGCCCATCTGGCTGGAGCTTATCCTGTTTTCTGATGAGGCTCACAGCCATGAAAAGGCAGCCTGTCTCAGAGAGGAAAACTCTGATTCCAAATCTTGGTAGATGAATACGGGTTAGCCCTGCAAGGCCTAAGAGAAGGAAAACCTTTTCTTGTCAACTCAAACAGGACCTTTCGGATCTTAAGGAATCAGTCTGTAGATTGAGTATCAGCTGATACTACTTGTTGACATGTCAACCAAGAGTCTGCCAGTGCTGGTCACCACTGTTGGTCGACACTTGGTCGGTATGTCAGTCAACACTTAGTTGGCACCTTGAACATCATGTGTATTGTGTATTGGTATAAAAATTATGTGTATTGTTAACCATTTTTGCTGAAATGACAGCTGTCGCAAAAGAAGAGTCTCTATCGCCTTATAAAACTTGGCTGTCAGGTGACTGATAGTGTTGTTCAATACTCAGCTAACAGATGCCATAAGTACACAACACCTGAATGTGTTCCGATGGATATCCCAGAAAATGGTGCACAGGGGCACTGTATGGGTCATATGATAACATGGAATATCCAATAAGTCACTGGTATTTTCTTGGTATAGTCACACTGACCCTTTAGGCATGTCTGTATATTCCTTAGGATACCATGAGAAAGTGTAACATTACtattttatacaaaaaaaatgcaaaatagaAAATTAATAAAGTGGCCAATAGAGTCAATGCAGTACATGATACGAAGGTTGAGTGGAATAGAACATGTACCggtaatttttttaattcttcatTTTAATAGGTCAATGTTGTTTCTTTATACTGACATTTGTAGCTGTCTATTTGCCATTTTAACAATTATCAGTTTATTTTTGAGAGCCACTTAAGCTTAAACCAAAGTCTGTTTTTAAGAATCTGTGCTTTATTACTCCTTTGTTAGTACAATAGTTAGTATTGCTAGAATGAAAGTtaccacaaaattaatatgatAGTGTCCCTTTAAACTTATTCAATGTAGTTTTTGATATGTTTTTAGATTGGATATGAGCAATGGTTATGtagtaattattaataatattattgtagcctaggttttttttttgcagtacaCGATATGAAGGTTGAGTGGAATAgaacatgtaatttttttattattcattttaaTAGGTCAATGTTATTTCTTTATACTGACATTTGTAGCTGTCTATTTGCcattttaacaattattagtTTATTTTTGAGAGCCAATTAAGCTTAAAGTCtgtttttaaagtgcccctaaccccaaaatatttttggggttaggggcacattaaaggggctaggtcacgctattttaggtattttgtttaattttgttaattatgagctcttaacatcaaattggcagagcaagagtctttcatttgcaaaatcacggcctcataacaactgagaatgattttccagctgtgtaaatgacattttgatatagactgatataaatttgaaaaaaggtgggccgatgtttttcaaatttacccaaattcaatccatttcaatcctctccagttttgtccatccatgtcccttcttggcttccccgtgttttgttagagttcttctatagttttgaacagttattttgatattttagtcaattccatgaccattcgatcagtgctgaaattgcctaaaattgcgtgacctagccccttaaaGAATCTGTGCTTTATTACTCCTTTGTTAGTACAATAGATTATAGTTAGTATTGCTAGAATGAAAGTtaccacaaaattaatatgatAGTGTCACTTTAAAATTATTCAATGTATTTTTTGATATGTTTTTAGATTGGATATGAGCAATGGTTATGTAGTAattactattaatattattgtagcCTAGTTTTTTTTTGCAGTACATGATACGAAGGTTGAGTGGAATAGAACATGTAATTTTTTGATTATTCATTTTAATAGGTCAATGTTATTTCTTTATAGTTGACATTTGCAGCTGTCTATTTGCCATTTTAACAAATATTAGTTTATTTTTGAGAGCCAATTAAGCTTAAAGTCTGTTTTTAAGAATCCGTGCTTTATTACTCCTTTGTTAGTGCAATAGTTAGTATTGCTAGAATGAAAGTtaccacaaaattaatatgatAGTGTCCCTTTAAAATTATTCAATGTTTTTTTATATGTTTTTAGATTGGATATGAGCAATGGTTATGtagtaattattaataatattattgtagcCTAGGTTTTTATATATTACATGGCTTGGTTGTTTGAAAGTCGGATAACAATAACCCAGAAAAGCTAACCAAAGTGTTATTATTTCTTGtataaaaaatgtttttcactgCTTGTGTTTTGAAACTCAAACTCAAAACTGAAGGACAGAGAATATAAACAGAAACTGCAATGTCAGAAACAAAAACTGGAATAAAAATCGTAGTTAATCTTGGGTTAACTTTATGGGGCTTGGAACAATATTGTGATGTTAAGtaataataaatttagaaaGTGCAAATTCTATATTCTTGTTTCCATTACTATGTCGGCATTATGTACCAACGCATTGGGTCAATTGGTGGTGCAAGTCAGTATTTTTTTCCAGATTGCTCACTGCACGCAGTAATGAAATCCACTGAAAATAACGTTCGACTGCTGCCACAATTCCTCAGTTTCCTTATGTGTTTTCCTGGAAATCCAAATCCTTCGCAGGGTGTTACCCTAGGCAATTGACAAGCTGATTTGTACTGGGGGACTAGTTAATGGTTGATGTTGCTGTGGGTAATTTTGCATTGTATGGGAGGGGTAAGGGGGCTGTTGAACATTTGTTGCCTCAAGATCATGGTGAAGCATGATTGCCTCAGGAGAAACCAATCTTTTTATATGTTGTGGATTGAAATAAAAGTCCTTCAATAGTTGTTAGCTGTGTATGAAGCTAAATAGAGAAGTTTTATTTTACAATCAATTGTTAGtagttaaaattaaatattacCCAAGTAGGCAGAAGTATGTTAGAGCCAAGAATAGAAAAAAGTAACGGTTATTAAAGGTTATAATTTTTAACAGt

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006668 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851 all species →	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR050742 all species →	Family	Helicase and Restriction-Modification Enzyme	Interproscan
IPR006935 all species →	Domain	Helicase/UvrB, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47396 all species →	TYPE I RESTRICTION ENZYME ECOKI R PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068676310.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.