Gene detail

Detailed information of XP_068677958.1 in Montipora foliosa

Genomic Location: chr11:8641556...8651368
NR annotation: XP_015761862.1, PREDICTED: uncharacterized protein LOC107340946 [Acropora digitifera]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068821857.1

TGCGATAGCGTTGCGTTCCTGTTACCCAAGCCGACGATTAGGTCAAAGTTGATGTAAGAGAATATCTCATGAAAACGGCGCAGCcatgaagtgtcccctggtaACTTTTTCTATGGTTCTTATCTTATTCTCTCAAGCTCAAGGATTTTGTGGTTCAAGACTGCTGCAAACAAGTCTTACGCGTGGCGCTTTTCGGGCggctgattggttgagaaaacaGCAAGATGAGAATGGCACCTATGGAGAGGGACACGTGTCTGCCATCGTGTTTCACTCCTTGAGGTTGATCGGGGATCACGTGGACAACGGATCCGAGCACTTGAATGCTGAGATCATCAAGAATAAATTGGGATCGATAAATGGGGGCCGCCTTGCCTATTATATCCTGGGTGCAATGTCCACCTGCAGAGACCCGAAGAACTTTTACAACATCAACTTGCTTCGAGCCTTGCGAACCAAACTGGCCAAATATCCCCAGCCGGCAGAATTTTCTCATCCTTTCCAGTACAGCCTCGCGGTTTTGGCGCTTTGCAGTAGTGGAGagaatttggaaaagaagaggaaggcCATCGTCGAGAAAATCACAGACAGCATTTTGTCGAATCAAACGGCCGATGACACAACAGCGATGAGCGATGACACGATAGCAATGCAAGTGTTAGCTTTGTCGTGTATCCGGGAATCGTTGAAAAGCGGCAAACGAATCAAGGAAACGAAGAACGAGAGGAGTAGTGTCGAACTGGCCATTAAACGAGCAAGTAAGAAAATCCTGAAGCGTCAAATGAACGAtagcagttttggagaaaatgaaGTCACTGCAGCCCTCTCTGCTCAGGCCCTGTTAGCAGCTGGCGTCATGACAACCAAATGTCCAGAGACCATGGGCTGGCTTCTGTCTCGTCAGAACCCCGATGGATCATTTATTAATCTGCTATCTACAATCAATGTGTTGCCAACTTTAATTGGAGCTCTGCCATATGATGTGCAGCATATAGCCTGCCCCGAGCGGAAGACTTCAGGTTTCACTGGAGAAGACGAGGAAACAAAAGAGATGATAAACGTCTGTGTTGAGCTTCAAATTGATGAAAACAGTTCTCCCAAGCAATTAAACCAGGCCGAGAATCAGATTCCTCAGAAACCAACTCCGACGAGCCTCCCACCACCGGCTTGTGTCGAAGTACAGAATGGCACAAATGCGCATGACATCCTGAAAGAGGCCGCAACACAACATGCCTGCTACGACTTCACTACCCGTTCTACTTCGTTTGGTCGAATGATCACATCAATCTGCGAAGTTGAGCAGAAACCTGCGGAAAAGTTCTACTGGATGATTTACATCAACGACAAACGCGCACCGGTTGGAATGGATGAGCTTCAGCCTAAAAATGGTTCAACTTTGCGTTTTCATTACAAAAAGCTTAATTGGGGTTAGCTGCATTAAATGACTCCATACAGCTACTTTTAAAACCGATTTACGGCCCTTTATGTGTAGTTCACCGGAATGTAACTATGCAATTTTGCTATGCAAATTTAGTCATGTGTGTAGACGAATAGTAGACTTTTCTTGGGTGATTGAAGTTTAAAAATACCGTAGTTGTAGTCAGGCatgataaaaagaattaaaaaacttgttgtcactgactaaagAACTTATGTAAAAAGGACACTTCGGTCAAAATACGATGACCtccttcagcataaaatggcttacgaaTACAAATGAGTGCTTTAAAAGAGCCGCAGAAACGTCACTTGGGATTTCCAAGGGCCTTGTAAATGTCCGGAATGTAAACGTGTTCATTAATGGAATTAGGTTCGCGAATTGAGTGCCACCCttctaaaaataatctttttgacCATTGGGAACAACGGTCAATGACCTTGACGTCGTCAAGAAGTTGAAGTTTCATTTCGCATTTTCAAGTATCCATACTTGCAAAAGTCAATTCCTGTTACTTGACCAGTAATTAACATTAAACCCTTTCACGTTATAAACTCGAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001572 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14478 all species →	DUF4430	Domain of unknown function (DUF4430)	Domain	Interproscan
PF01122 all species →	Cobalamin_bind	Eukaryotic cobalamin-binding protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051588 all species →	Family	Eukaryotic Cobalamin Transport	Interproscan
IPR027954 all species →	Domain	Transcobalamin-like, C-terminal domain	Interproscan
IPR002157 all species →	Family	Cobalamin (vitamin B12)-binding protein	Interproscan
IPR008930 all species →	Homologous_superfamily	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10559 all species →	TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015889 all species →	Biological Process	cobalamin transport	Interproscan
GO:0031419 all species →	Molecular Function	cobalamin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068677958.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.