Genomic Location: chr11:38422823...38442870
NR annotation: XP_029205080.2, histone-lysine N-methyltransferase SETD1A-like isoform X1 [Acropora millepora]
| CDS | |||||
| LOC137975020 | |||||
| Transcript |
| rna-XM_068822053.1 |
| Protein |
| XP_068678154.1 |
| Uniprot term | Description |
|---|---|
| Q1LY77 | Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio OX=7955 GN=setd1ba PE=1 SV=2 |
| Q8CFT2 | Histone-lysine N-methyltransferase SETD1B OS=Mus musculus OX=10090 GN=Setd1b PE=1 SV=2 |
| Q66J90 | Histone-lysine N-methyltransferase SETD1B OS=Xenopus laevis OX=8355 GN=setd1b PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11764 | N-SET | COMPASS (Complex proteins associated with Set1p) component N | Domain | Interproscan |
| PF00856 | SET | SET domain | Family | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR046341 | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR044570 | Family | Histone-lysine N-methyltransferase Set1-like | Interproscan |
| IPR024657 | Domain | COMPASS complex Set1 subunit, N-SET domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR001214 | Domain | SET domain | Interproscan |
| IPR037841 | Domain | Histone-lysine N-methyltransferase SETD1A/B-like, SET domain | Interproscan |
| IPR003616 | Domain | Post-SET domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45814 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0042800 | Molecular Function | histone H3K4 methyltransferase activity | Interproscan |
| GO:0048188 | Cellular Component | Set1C/COMPASS complex | Interproscan |
| GO:0051568 | Biological Process | obsolete histone H3-K4 methylation | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11422 | SETD1, SET1; [histone H3]-lysine4 N-trimethyltransferase SETD1 | EC:2.1.1.354 | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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