Gene detail

Detailed information of XP_068679012.1 in Montipora foliosa

Genomic Location: chr1:18806784...18814196
NR annotation: PFX22002.1, Contactin-associated protein-like 2 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068822911.1

TTAGCTAATTCCGTGGAAGATTTTGATATATTTTGCCGACAAGGAGGATGACAAGCATTTGGCAGACATCATTAAGAGACTGAAAAAGAAACGTTATGAACGATAAGAAACATGCAGGTGCTGATAACCAAAGGGCAGGAAAGAAAACAACGGAACCCTTCGTTCAGTAAACTGCTATCCATTTCCCTCATATTGTTTTGCACTCAGCTTATTGCGTTGGTAGTGCTGGCAGACGCACAGTGCCGCGAATCAAGAAGTGAAGGAGGAGTCGCCCTTCTGCACGCAACATACCACTACAAAGTTGCAAAAAGCTTTTCTAACTGCGTTAACGAGTGTCTCAACGATCCGCTATGCATGAGCATCAACTTTTGGTGGTACACCAAGAAATGTGATttgaacaacaaaagaaaggaaCGCAGTTGTTCCGCTTGTCTCGTGACTGAACCATACTCAACCTACATGGGGATGGTGAAACCCCTTGAAAACCAAGGACACGCCAAATCTTGTACCGCTTTGACAAGGTTGGACCCTACTTCAAGGAGTGGAGATTACATCATTGATCCAGACGGTAATGGAGGCTTGGCACCATTTGAGGTAACCTGCAACATGACTGAAAAGAATGGAGTTGGTGTGACAATCATCAGTCACGACAGTGAAAGCAGAACGCATGTCCAGGGATGTGAACGAGGTGGTTGTTACTCACGTGACATTAACTACACCGGAGCGAGTCTGTCTCAGCTGGCAATTCTCACGAGTATCTCGTCACATTGTGAACAGTTTATCAAGTACGAGTGTCTTGGTTCCGTGATTTTTCGCAGAAAAAATGTAGGTGGATGGTGGGTGTCACGTGACTTGAAGAAAATGACGCATTGGGGTGGAGCATCTGGTAATGACAAATGTGCCTGCGGAATGACCAACTCATGTGCAGACCCCAGCTATGGTTGCAACTGTGATAAGAACGACATGGTCTGGCGTGAAGACAGCGGTCTCCTCACTGACAAGACAAAGCTTCCAGTTAAGCAGCTCAGGTTTGGAGATACTGGAGACACAGGAGAGCAAGGGTACCACACACTCGGAAAATTCAAATGCTATGGAACAGCATGATCTCGAGAGTCTATCACGGTCTAATGAAAAAGGAACTGTCATTGTTGTTATGACTCAGGTTACATCACGTAATTTTCACGTAAGTTGCATTGGATGGAACATAATATCcacaaaaataagaaactgcacaaaaattaacaaaatataGAAACATAGAACCACAGAAACGAAAATTTAAAAGCCCTAAGTAGGCTAAGATGAATCACACGCAAGGCTACATGTCAAACTTTGCCTATTGTAACAGTTACGGTTGACATTTTTTGCAGACAAAGAGACTTTTGTTCCCTATCTTTGGGGATTCATCTGCTGGGACACAATTAATTTCAATCGGTCACAGTCGGCAAATTATGGGCGACAAAATTTTTGCTCCCAACGGTATCCTCCTGcaataaaaacagaaagaacaaTAGGGTCTGGGTAAAAATATACTGACCAGAAGGGGATGAGCTTGTTAGTCGCCAATTTTTGGGAACTAAATAGCACTAACTCACTTCGATTCTTACCTTCAAAATGTAAGGGagtaaaaaattacaacttAGAATATGTTCGATGCTTGTATTTCGCGGGCAAGCGGCAGGGAGCTATGAGAGGCGATTACTCTTTTGGAAAATAATCTCACTGTGCAGTTATCCTGTAAACGCCGAATTTACATTTACTAAaattaagtaaaacaaaagCTGACGTACTAGAAGAATTTAACCCATGGTGCAAGGAACAtgaatacaaaacaaaacagctgtCGCAAAGTAGTAGGAAAAAAGCGACAAGGAGCTTTTTGAGATGGCCTGAATGGGGTAACTGAATCACAGCTAGAGATAAGCTGACATTTCGTccattatttaattaatttctcAGTTATTTGCAGACATTATGCATCTCGGCTCATTCGCCTAAAAGTAACTTGAAATTTCTAGTGTATCAGTTTTATCATCCAGG

Protein

Uniprot

Uniprot term	Description
Q94887	Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan