Genomic Location: chr11:9088956...9091927
NR annotation: CAB3985004.1, Enzymatic poly [Paramuricea clavata]
| CDS | ||||
| LOC137976641 | ||||
| Transcript |
| rna-XM_068824012.1 |
| Protein |
| XP_068680113.1 |
| Uniprot term | Description |
|---|---|
| P04588 | Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype A (isolate MAL) OX=11697 GN=gag-pol PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00589 | Phage_integrase | Phage integrase family | Family | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR002104 | Domain | Integrase, catalytic domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR010998 | Homologous_superfamily | Integrase/recombinase, N-terminal | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR35617 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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