Genomic Location: chr12:34453525...34516617
NR annotation: XP_027055638.1, fibrillin-1-like [Pocillopora damicornis]
| CDS | ||||
| LOC137978427 | ||||
| Transcript |
| rna-XM_068825352.1 |
| Protein |
| XP_068681453.1 |
| Uniprot term | Description |
|---|---|
| P10493 | Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 |
| P14543 | Nidogen-1 OS=Homo sapiens OX=9606 GN=NID1 PE=1 SV=3 |
| Q9GLP1 | Coagulation factor V OS=Sus scrofa OX=9823 GN=F5 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00058 | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF12946 | EGF_MSP1_1 | MSP1 EGF domain 1 | Domain | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF06119 | NIDO | Nidogen-like | Family | Interproscan |
| PF07474 | G2F | G2F domain | Domain | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR003886 | Domain | NIDO domain | Interproscan |
| IPR000033 | Repeat | LDLR class B repeat | Interproscan |
| IPR006605 | Domain | G2 nidogen/fibulin G2F | Interproscan |
| IPR009017 | Homologous_superfamily | Green fluorescent protein | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR003645 | Domain | Follistatin-like, N-terminal | Interproscan |
| IPR024730 | Domain | Merozoite surface protein, EGF domain 1 | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR002889 | Domain | Carbohydrate-binding WSC | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24039 | FIBRILLIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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