Detailed information of XP_068681794.1 in Montipora foliosa

Genomic Location: chr12:36296269...36316022
NR annotation: CAH3040691.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95LV5Protein Smaug homolog 1 OS=Macaca fascicularis OX=9541 GN=SAMD4A PE=2 SV=2
Q5PRF9Protein Smaug homolog 2 OS=Homo sapiens OX=9606 GN=SAMD4B PE=1 SV=1
Q9UPU9Protein Smaug homolog 1 OS=Homo sapiens OX=9606 GN=SAMD4A PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050897FamilySMAUG/VTS1 RNA-bindingInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR037634DomainProtein Smaug, SAM domainInterproscan
IPR037093Homologous_superfamilySmaug, PHAT domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12515STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030371Molecular Functiontranslation repressor activityInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27396SMG; protein Smaug-Messenger RNA biogenesisko03019deepkoala

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