Gene detail

Detailed information of XP_068681832.1 in Montipora foliosa

Genomic Location: chr12:20820766...20826089
NR annotation: XP_027052652.1, calpain-B-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068825731.1

aaagttgtgttacgtTTCAGTTTCTCCTCGTAAATCCTAACAATGTGGACAAACAGAGATAGCTCAATGCCAATCTCAGGTTAAAATGCAAAGTCATTGCTGGTGTAAGGATGGATCTGATAAATGCCGAATACTGTTCCTTGACATTTTCACTAAAGAGAGATAAAACAGGCGCTCTTGGATACAGCGAGTTCAGAGGACTGTGGACAATATTGGGAATGTGGAAGGAAACATTCCATGCGTATGACAAAGACAACAGTGGAGATATGAATCTTTACGAGCTTCGTGATGCTCTCATCCATTTAGGTTATCAACTCAGCAACAATGCCTTGAGTTCTATTATCCTGCGATACCACAACAAAAGGGGACCATTCCATTTGATATTTTCATACAGATCTTAGTGCGAGTAATCGTCATGTTTGATACTTTTCGAAGACACGTGATAAAACGAGGCGGGCGATCGGACAAAGCAGTGTTTACTATTGATGACTTTATTGAATCCACTTTGACAGTTTGAAATGGAGCAAGACATCGCTTCAAAATGAGGGCACACCGAGTAAtccaagaaagaaaacaaaacagaagcaaCCCGAGATAGAGAGCTGAGCCCACATGAAAATCGACAGAATACTGAACAATTGACTTGGAGGTTGTTTGAAAGTATTGAAatggttgttttttttgttgaatattGATAAAGTATATGGCGCAGAATGGCTATTGTACAAATATTAGTaaagggaagaaaaaaaaaagcaattagaGTGAAAAGAAGCGTACAGAAAAATGGAAACGCGCAGATTTAGTCTTTTCTGACCGTCCGAATGTCTAGCTAATTGGATCAGTTCCTCAAGAAAGTGTGGTGTCCCGACTGTTGAATTGACGAGTGAAGcacagaaggaaaaaaaacattgtttacatttaagataaaaaaaaattgttttacgAAGTCAATACCTTTCTcatatctttttttgtttttgaaactcACACAAAAAAGTGTCAGTCGGACGCGTGCGACAGTAAATAGGGAAAATACGCAAAAAGAAAGAGTTAATTAATAAGTACGCGGGTTTTTTAAACGCGGATGGGAACCGGAAGACAACATTTAGCGTACCAGGACattggtgtctcccagatttttatacttatcatgtctaatggaaaaaagaaaaaagatgctTAGCAATGTGAATGTCGTTGTgcgaagacaagttaaaagtaaaacagctcacttccggttgccgtccgcgtctcaaattCGCGCATGCACAGAGTTTTTTCCTTCAGTTTGGCGATTGGGATAAATTCACGGATCACGCGAAACCCCATTCAGACCCTGTGttattgacacctgaaaaattcaggtggattCAAAGGGATTAGTAACCAAGTCACCGATGACCTCTGCGGTGCCGGTGAAATGCTCTACTGGCAATGTTAGACGTACTTTTATGTacaggtaatcgcatggggccgagtactattaaggattaattgcacgagtgttttggaaattttccaaaattgcccgagtcgcgaagcgacgagggcaatttggaaaatttccaaaacacaagtgcaattaatccttaatagtaagaggactcatgcgattacttgtttatcaataaagggcaaaattcaTACGTTGCTATGCAACGGATTAACCAATCATTAACAGGTAATCAAGccctctcttgattaccaaaaatgtcctcgattaagaaaaaatggccCCCGTCTCtgccaatcagcgctcagtaattttgccctttattgataaggaTGATAATCAACcggggcccagttgttcaaaagccgattaacggtAATCCCAGTTCAAAAATTAACCGAGGagtttattctctactcccaaatgctgttcaatgctgatattcggcaaaactctacattagaagaagtcaatcttgaaaaacaaaaataagcaaaagaaactttcaccaaaaagttgacaacatgaaacaaaagtttacgctaatcctggattaacttaatcggcttcccaacaaccgggccctggagatTTTCTGATTTTTCCGTCTTTCTTCGTCAAATTCACCacacatttataattatacaACTACGGTTGGCCAGTAAGTTATTTCACACGGCTTCTGAATGTCGTGTTCTCAAAAGCCAGCAACCTTCAACAATCAAGATTTAATACATCCTCTGGACTTTCCACAATTCAAAGAAAACCTTTCCACAAAAATATGATCTCAGAAAGACCATTTCGGGTGATGTTAATAATTTTTGTGCAAAGGTTTAGTATTTCATGACATCCTTTACACTGTTgacacacatacatgtatgtagaaATAATTAAATCTTTCTACAGAAATGTATAGTCAAGTACTCTAATGAAACTGATGAAGCCCCATACTTAagtaaaaattatttcattgttgcaaaaaaacaaaagaaaaaatgttgtgtttttgCCTTCAGCTTTTCAGTCTGTGTAGAAAGTGCTAAAGAGAGGGAAAGAAGGAACTCCTCTCCTCAATCCCCTCTTTCCTTCCCCTTTAGTGCTTGGTATGCAGGCTATGAGCACAACCCCTGTACCATACTGGTACAGCACTGTACCAGTATGGGATGCACAACTTATTTGCCCCTGACTAAGCTAACAAAGACATGGATGTATCCCTGAGATGAAAATCGCTGAAACCACTTTGTCAGTCTGGTTTCAAAGAATTATTTTCTGTATTGTGAAGTAGTTTGTTACATCAATGACCATTACCTCCATAAGCTGGGACATAGGTAGAGGTTCTCTTACgtttaaaaagctttaaaaccaaaaaaaaaaaatgtatacagTAGTTTACATGAATGCATTTCAA

Protein

Uniprot

Uniprot term	Description
Q9FYE4	Probable calcium-binding protein CML50 OS=Arabidopsis thaliana OX=3702 GN=CML50 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13405	EF-hand_6	EF-hand domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46735	CALPAIN, SMALL SUBUNIT 1 A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23924	SRI; sorcin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala