Gene detail

Detailed information of XP_068682358.1 in Montipora foliosa

Genomic Location: chr12:29564690...29573692
NR annotation: XP_015779562.1, PREDICTED: probable cell cycle serine/threonine-protein kinase CDC5 homolog isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068826257.1

ggatgcgcaaaacgtatgcgcaataacaatagtaggcaccgtcctttttTAAAGATGGGAAATACTTCTTCGAACGATGAATTAAAGCTTCTGGAGGAAATTGGCAAGGGGTCCTACGCTGTGGTGTATCGGGCGGTGTGGAGGAACAAACATGTGGCTGCGAAGAAACTCCATCCATATGTTTTGCGGAGGCCGGAAGCCATCAAATATTGCGAGGACTGGAAACTTTTGAGCAAACTGGATCACCCCAATGTTGTTCAATATTTAACCGTTGTTTTACCTGAGGATTCACCGAAATCTAACGAATCGACAATACTTGTAACCGAGCTGTTGGACCAAGATCTGAAGCGATTCATCGAGAAATCTAAACGAAACGTCTCCTTTCGCGATACAGTCAGTATCATGCTTGATGTTGCCCAAGGACTGAGTTACCTTCACGACTCACCTAGGTTTATCGTTCACCGCGATCTCGCTTGCAAAAATGTCTTGTTAACTGCCGACAGGCGAGCAAAGATCGCTGATTTTGGATTAGCAAGATGTTTTCCCTGCGGAGAGATGGCTGCTTCCGCTAACCCGGGGACACTGGCATATCGCGCTCCAGAGACATTTGGAAAGTACCTTTTTAGTTGCAGAAAGATCACGTACGGTCCAAAAGCAGATGTTTTTTCATTTGGTGTCGTTATGTTGGAAGTTATTGTTGGGCATCCTTCAATAAGAATATCCGAGTTGCGTACTGAAGATGGAGAAATTGTCCCTGAATGCTATCGTCGGAGCGAAGACCTTCACGAAATTGACGTAGAACATCCTTTACGGTTGCTCGTCCTTCGTTGCCTCGAAAACAATCCCGAAAATCGTCCCACGGCCCGTGAACTGGCAGAAGAGCTCACTAACCACAAGAACAACAATGATTTTCTTCAAACGCAAGGACGCCATCGTGGCAAACACATCGTCCATCGAATGCCTGAAAGCAAGTTCGATTATGAGTTCAAAGTTGTACTGGTGGGTGATACCGGGGTCGGCAAGACAAGCATTGCGACAAAATTTGTGCAGCCCAATCTCCCGTGTCAGGACCGGAGACCTCCAACTCTTTGTTACGGCGAATTCAACGAGCGACTTCAACTCAAAGGAAAATCTGTGTTTCTTAAAATCGTCGATACATCAGGACAGTTTGACACCGCCAGCTCTCTTCCCCAGTACTATCGTGGTACTCATGGCGCGGTTGTTGTGTTTGACGTCACTTCGTGGGATTCGCTTGTGAACGTACGAACGTGGGTGGCAATGGTTCGCGAAAAATGCAGTCGTGACATGCCGATTATTCTCGTCGGGAACAAAACAGATTGCGGAGCCCGGCAAGTAAATACCGAGACAGCCGAAAACGTGCGCGACGAGTTTGACCTGTTTTACATTGAAGTTAGCGCTAAAACTGGAGTCAACATCGACGAGACGTTTTCCGTACTGACAGAACAGCTTATGCTACGGAGGGACCTGCAAACATCCAATGGCGCCTCTTCTGTCGCCAGTGTCTTCTGTCAACTGCCTTCAATGTCCGCTCTTCGCGATTCGCCCTGTTCTGTGGCCAGTGTCGTTTGTCAACTGCCTTCAACATCCGCTCTTCGTGATTACAAACCCCCAGCGAAGTTCACCATAAAAGAGCCTTCCTCGCGTAGAAGAATACAAAGAGACCCTGATAGTGTTAATCTGGTTGCCACGACGGAAGATGGAAACCCCGAGAAAGCTACTAAATACTCTTCCACTACTTATAATAAGAAGCAAAGGAAATGGTGGTGCTGTTCATAATTCAACTTTTAATTACGACCCGGAAACAGTAAttacaaatacatgtatgattatTCCAAAGTATCGAATATTAATTTGTCACTTTCGAACACTCCAGAGCCTAGGTAGTACATTAATTTACTATTCATTTCTTACGTGGTAATCAACGCTGCATGATCTAAGTCGTCTTGTTCCCTAACTTATCTTTTGATCATTGTCTTGTTGCAGCAgttaatttcaaatttgattATTCCACTGAGTGTCAAATAAGAAACTTCACAacctcggtttcaaagcgaggctaagtGCGACAGTTATATGATGGTCATAACCTGATCTAAACGCTCGGgtggttgggagaattcgagacggctatgcaaacccgagacgcagtcatGTTTATATACTCATGCAAACACGCCTATATTGACCAATGAAAGCAGTCTGGCGTACTATCTTAGTTGtttgggagtttaagcaaagacgacggctatggcaacgacaacgccacaaaagtTGATTAGTTAAGAAAGGAAGAATACTCGTGCTggacgtgcagcacgaattttttttcatttctttgccgtacttcAC

Protein

Uniprot

Uniprot term	Description
Q9FPJ4	Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1
Q7T3A4	Ras-related protein Rab-13 OS=Danio rerio OX=7955 GN=rab13 PE=1 SV=1
Q9LNK1	Ras-related protein RABA3 OS=Arabidopsis thaliana OX=3702 GN=RABA3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR051681	Family	Serine/Threonine Kinases and Pseudokinases	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44329	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan