Gene detail

Detailed information of XP_068682467.1 in Montipora foliosa

Genomic Location: chr12:30145674...30152636
NR annotation: XP_029195013.2, probable 2-ketogluconate reductase [Acropora millepora]
Species abbreviation MFOLI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068826366.1

CAGGTTctcaggggcctgtttctcgaaagtcccgaaactttacgggccattttcgggtgtcacaattctcaagaaaggagaggatttaagtcgtcaaacttcacagtcacttttctttttgttaccttgaaaacatgtcaaaagatcggctttccaaatcaaacggctggcactttcacaaatggcttttcgggcccgaaaagttttcgggactttcgagaaacaggcccctggtctGTTATTGCGATGGAAACCCTTACAAGACCTTTAATTGTTTGTATACCCGGCTTTCATTTTCCCCCGGCAATTCAACAAAAATTTGACGAAGGCGTCAAAGATTTCGACCTTATAGTTGCTGATCCACGAGACATCACGGAGGAGGCTGCCCAAGCAGTCGAAGGCTTGGTATGTTACCCCGCAAAACGTTATCATCTTGACGGAAAAGTAATGGACTTATTTCCAAATCTCAAAGTAATAAGTAGCTCTAGTGTTGGTGTTGATCATATTGATGTTGTGGCGGCCAGTGAACGCGGGATCGCGGTCGGAAATACACCGGGTGTTGTATCGGATGCTACAGCAGACATGGCGTTTGCGTTATTGATGGCGTCTGCCAGAAATGTGGTAGAAGGGGACAGAATTTCAAAATGTCCAGATACCAAAGAGTTACCTCACTTGTTTGGCTCTGAGGTTTGTGGATCCACAATTGGAATTGTTGGAATGGGAAGGATTGGGAGTGCCATAGCCAAGAGAGCTAAAGGCTTTGACATGACAGTTCTCTATCATAACAGGAAACGGCGGGATGTTGATGAGGAGCAATTTGGTGCCCAGTACTGCAGTACTCTAGCAGAACTGCTGTCTCGGTCTGACTTTGTGGTTCTTTCCACTCCTCTTACACATGAAACAAAACACATGATAACAGCTAAGGAACTATCGATGATGAAGCCAACCGCAACACTGGTCAATATTTCACGTGGGGGACTTGTCAACCACGCTGACTTGACAAATGCACTACAGAACGGAGTGATAAGAACAGCCGCGTTGGATGTGACAGAACCAGAACTGCTCCCACGAGACCACGCCCTATTGAAATTACCTAATGTCATCTTGACCCCGCATTCAGGAACAGCAACTTTAAACACAAGAATGAAAATGTTGGAAGTGGCACTGATGAACTTAAAGGCGGGCATAAAGGGGGAAAAACTTCCTTTTGCTGTAAATTGACGATGAAACTTCACTATCCACTACAATGACGATGGTTTTCTCAGCTAATAATTGCGAATTTCAGACCGACATTTGCACCACACCAGTATTTAGGAAACTTCACTGGCTTCCAATCAAGAAGAGAATAATTTACGAGATACTCTTACTGACGTACAAATCGCTGAAAGGGCTTGCTCCAGACTATTTAAGGGACTTATTAGACCTGTATGTGCCAACTAGAATTTTTTAGATCTGGATCAAGACATCTCCTCCGTGTCCTTAGAATCAGAACAAACTACTATGGTGGAAGTGCTTTCTCTTCGTGTGCACCTAAGCACCCAAACCAACTACCCTCGTATATTAAACAGGCAGCTTCTGTagaaattttcaagaaagaacTTAAGACATTTCTTTTTGACAATGATATCGACTTTTTGACTTgactatgtatatatatatatattattattaaaaggaaaggaacttcatttaggtgtctagtcgttctagtgctagAGCGCTAACTGGggaaactgtaaactgaaatcaactaATTTCTTGAGTAGagcggaaaaccggagtacccggagaaagacctctcggagcagagtagagaaccaacaaactcaactcacatctgacgccgagtctgggaatcgaacccgggtcacattggtgggaggcgagtgctctcaccacaacGCCAGCCCGCACGCATGAACGCGATGACAAGTCTTTCTGCTATAtgaatatatagatttagccaagcctaaaagcggagctccaggCCGGTTATTTACTCTTATTGGCCTTCCTTAAACAACGAATTTACGGGGTAAAACAATTTTGAATTTCTTCAGTTTGTTTAGCCTTGacgaaaaatgcaggaaaaaaaatgttttccaaaccgttttccacctgggcatgaaaaggaaaaaccttaaataacaatgaccacgaccaggttttctgaggccgcgagactgagcacctcCAGCAAACAggaaaccattgttttaacgaaaaccgctcgtcagcaaccttggttctggtcatttTTGTCTAAGGTGTTCCCATGAAAAGCGTCGACTCGAGCTTTAGTTGACgaagtatggccgtgtagccgagTCCAGCCAGAAAAAGCGCGCGAAAAGTCAAGCCTCGTTTATGTCTAAGTGTCCTGTTACAAAAAGTTAacatggcttgagcctgcgatccaatcgaaaatccattattattattattattattattattaggatatTATTAAATGATCATTAAATTATTGGGGAACTTCGTCGTATGTACGCGCCCACTAGCAATACCGCTTGCCATGATTACCATGAGAAAAGCAACTCATGAAGTAGGTTCCTATGAGTATGTGCACCGCTTGGCGGCCTTTCAGGACgctggagctccgctataagcTGCGTTTTCCAAGACGTGTTCAAATCGGTAGGCAGTTGCAAAATGCGTCTGATTCCCGCCTCTACAATGGAACAGCTGTTTGCACATATCCCAGCTCATGGGGCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UYR1	Glyoxylate reductase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=gyaR PE=3 SV=1
O58320	Glyoxylate reductase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=gyaR PE=1 SV=2
B1L765	Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) OX=374847 GN=gyaR PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001277 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02826 all species →	2-Hacid_dh_C	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	Domain	Interproscan
PF00389 all species →	2-Hacid_dh	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029752 all species →	Conserved_site	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1	Interproscan
IPR050223 all species →	Family	D-isomer specific 2-hydroxyacid dehydrogenase	Interproscan
IPR006140 all species →	Domain	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain	Interproscan
IPR006139 all species →	Domain	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10996 all species →	2-HYDROXYACID DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068682467.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.