Genomic Location: chr12:40837662...40851073
NR annotation: XP_029187444.2, interferon alpha-inducible protein 27-like protein 2 [Acropora millepora]
Species Montipora foliosa · all data for this species · gene families
| CDS |
| LOC137979776 |
| Transcript |
| rna-XM_068827127.1 |
| Protein |
| XP_068683228.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002003 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06140 all species → | Ifi-6-16 | Interferon-induced 6-16 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009311 all species → | Family | Interferon alpha-inducible protein IFI6/IFI27-like | Interproscan |
| IPR038213 all species → | Homologous_superfamily | IFI6/IFI27-like domain superfamily | Interproscan |
XP_068683228.1. This gene does have a gene model — the search simply returned no hit.| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
XP_068683228.1.Transcript abundance of XP_068683228.1 across 36 RNA-seq samples of Montipora foliosa. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Polyps | 36 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (MFOLI_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
