Gene detail

Detailed information of XP_068689696.1 in Montipora foliosa

Genomic Location: scaffold_249:86541...92110
NR annotation: XP_015777320.1, PREDICTED: disks large homolog 4-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068833595.1

CATGTGGAATGCAGCTCACGAGAAACACTCAAGATGGAGGGCCAGAGTgataatgaaaggaaaaaactcTGGGACGAGCTGAGCATCGGCACAGAATCATCGCGCTTAGTGGTAGTCCATTTAACAAAAGGGAACGGAGGCTTTGGGTTTAACATTCGGGGAGGAGTTGATCACCCTCATGTTGGCTCAGACCCAGGAATATTTATAACTACAGTCAAGGCTGACAGTGTCGCGGGAAGAGATGGAAGACTAGAACCAGGCGACAGGATATTGGCACTGAATGACATAAGATTGGATTGTGTAACTCATGATGTTGCTGTCAATGAATTCCGTAAAGCAGATGAATCTGTTGCACTACTTGTAGAGAAGAATGCTGAGGCTTATCTACTGTCAGAACCTAGTCCAGCCTCACCTGACACTTCGTTTGTTGATGGTCCAGCAAGTCTTGATTCTGTAGATGAGGAATCACCTGCTGCCACCAACCTTCTCTCTCAATTTTACGAATCCAAGCTGGGAGCCTTGTCCATTGGATTGGCTGTTGGTAGTCTAGCTGTTTTTATCCTTTTAAAAATGTACAAGGCAGCCAAGTCATAACAAAAGTTGTCTCTTCAGTGATAACTATCGTTTCGTACACCAAGGTTACAGTTTCAATGCGGAACTAGTGGTATCTCCATTGCATTGTCTATCAAGGGCTCTCGGTAGCAAAGAAGGGAATTTGGAGAGTGAAGGCTCCAGTCAAAACAAAGCTTCAGAGAAGCCTCAACcatttttattttgtacttCAAGGTCCTTTACCCGTGGCCAAATAGACCAGTTTACAGTTGAAGCTGAGTTGCTTGGCCTAAGAATAGAAGTGAAgttgccggtgaccctgctttcatacaaacctttgtgctttttctaatgGTAATGTAGACTAATAAATAGAATTACAACAGcataatttgcatgacaaaaacCAGGGACAGATCTAGGAGGAGGGTACAGGGGGTGCCTACCCCCCtgagatgacctgcggctttcGAATACAACTGGTGTTCTGTTAAAAaaacgtcaccagtcagctacgccattccttagCGGTGCAACCCCTCCTAACAAAAATCCCAGGTTCGCCCCTGAAAGCAGTGAgatctgtatcaatacaaggtcacagGCAGCGTCGCGGCTGTTCATAGGCTACagtaggtcactgagcaaacaataAATATTGTAAAATGGCCCATTGCAATTCAAGTGACCCATCAGAGGTCCATTTCAGATGATCAAAACTTAATGTTCCCACACATATACGTGTCTTATACAGCTGCATAATTAGATTCATGGTACTCTACATACAGATCACAATGTGTCACAAGGTATCTCCCTAAGCCTAAGAACTTTTATGTAATAGTCTTTTGGTGGGGTTCTTGCTAAGGCCATGGGTGACTCCAACACCAGTTAATGTGAATCTTATTATGGCTTTAATGGAAAACATCCCCATGAGATTATAATATCTAGAACAGATTTGTAATGAAGGCCGTGAACTTCTGAATTGCCTCAAAATGTAGAGCAAAGTTTCTGGATGCCTTTTTGGTTTAGCCAGTGAGGATAACTGAAAGTCAACCGTGGATTCCACAACATTCTGGGTGACAAACATCTCATATTTTCCACTCCTCCCTTGTAGTTATCAAATTTCCTTTGATGACAGCGGAGGGGgcacttttgtccaggattgacccAAACTACATGCAcaccaattttgacatccaacatgaggtgtccctttaagtctatgCATTCCCTtcctatttccaacaatgaggtaaggtggggggggggggggggggaagattAGTGTAATTTGGGAAAAGAGCGAGGGGACACTTggtgatgcttattgaaatctgtgtgcatctaattaggatcaatcctggacatatcttGAGTGCTGAAGCTTTGATTTGACCaatacaatgttgttttaaggTGTTAACATTGTTCTATCTTCATTGAGAGTTTTTTACAATGAACATTGTTTTAAGGTGTTAACATTGTTACCGTATATCTTCATTGAGATTTTTGCACTATTTTACCTATTTGAAAATTCACTTGAAACATACATTGAATGCAAAATTAGTTTCTGAAGCATACAAAAAGCATCACACCATCTTTCTGAGCATGTAATATAATAAAAATCATGGAAAGTACTTTTGTGGGATATTtacacaataacaataatagtaacaataaaattttgatgatgataatgataataa

Protein

Uniprot

Uniprot term	Description
Q9WVJ4	Synaptojanin-2-binding protein OS=Rattus norvegicus OX=10116 GN=Synj2bp PE=1 SV=2
Q91XM9	Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=2
Q63622	Disks large homolog 2 OS=Rattus norvegicus OX=10116 GN=Dlg2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050614	Family	Synaptic Scaffolding LAP/MAGUK Families	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23119	DISCS LARGE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009790	Biological Process	embryo development	Interproscan
GO:0016323	Cellular Component	basolateral plasma membrane	Interproscan
GO:0030054	Cellular Component	cell junction	Interproscan
GO:0043113	Biological Process	receptor clustering	Interproscan
GO:0045197	Biological Process	establishment or maintenance of epithelial cell apical/basal polarity	Interproscan
GO:0097120	Biological Process	receptor localization to synapse	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20057	SYNJ2BP, OMP25; synaptojanin-2-binding protein	-	Membrane trafficking	ko04131	deepkoala