Gene detail

Detailed information of XP_068690971.1 in Montipora foliosa

Genomic Location: scaffold_435:61327...63690
NR annotation: XP_015753641.1, PREDICTED: apolipoprotein L3-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068834870.1

aagtgCTCCGTCAACAATGGCGAAAGATGATAATAGAGACGATGTAGCAGCAACTAAGGATTCGCTTATTGTCAACCAAATCAGAGAGGGGTTTGAAGAGTTACGCAGACTGAGAATGGAATTAATTGACGCCTTTGTTCAGTGGATACCGATCAGGCGGCGTACTTTAAAGCGGTTGGAAGAGCTGGCGACAAAACTAGACGAACATCACAGGAATGTGAACATAGCAACCATTACAGGAGCATCCATGGGCACTGTAGGAGGTATTCTGTCTCTGGCAGGTCTCATCACTGCACCTTTCACATTTGGTGCTGGGTTGATTGTGTCTATTGTGGGAGCTGCGGTTGGTGGTACAGGAGGACTGGCTATGTCAGGCTCCAAAGTTGTTGAGAAGATCTTGGAAAATTTACGTCTCAAAGATGTTCAGTTGGCAATTGATGAGGATCACACAGCTTGCGTTGAACTTGAACAGCAGTTAGACTCCCTGAAAGATTTTATCTCTCAGTTAGCAGAGTTCCTTAAGCCGTTACCTGACGACGCGTTGCTACTCAGGGAATTGGAAGGGAATGGGTTCCAGTTCTTGCGCGCGCGAATCTTTTCTAACGTCATCGGCTCATCAACAAAAGAGAAAGTGGACATTGGTGCTAAGTTCTTCCGAGCGGTCTCGGCCGCCGCCCCATTGACAACGTCAGCTATCGCAACAGCACGCACCGTGGCACGTACCGCGGCTATGGCAGGTACGCGCGTGGCGCACTACGTTGGCTCTGCCATAAGCGTAGTGTTCATCCCTTTAGATGTTACTCTGTTAGTGAGATCATCTTTGGAACTCCATCGTGGATCCACATCCTCGGCTGTGGAGGACATTAGACAGAGATTGAGTGATATGAGGTGTCCAGATGTGGAAGAAATTCAAGGTTTGGTAGAAAGTTTCATCGATGACAAATTTAATGAGGCGTATAACAAGATGaatgacaaaacaaacaaagaaaatggtGTTGGTGATGTTTGAGACGAAAGCGGTAATAAAGCTCAAGCTAAGGCGAGGAACTGATATGGGTTGTGCCCTAAGCAAATCCTAAGTGAGGGCAGAATAGCGCTACTAGAGCGTTTTTGAAACAACCAATTACATGTTTGTAATACGTAGTCGGAAACCTCATTTGTAGTGCAGTTTCCTTATACCTTAGACTATAGGAGTATTTAGCATTTTCTGTAGCTAGGAAAGACGAGAAATTTATTCTATTTAAACTCGAAGAAAAGGGGCAATTATTTTTCAAGATTATAAAGCCCTTTCCGGAGGGGCTGGAAGGGGTTTCTCGTGATCCGTGAATTGACCCGACAACAGAGCGTGTATCGGGAAAACTGAAGAAATACAGCCGTGATTCGTGAATAATATGTATACCGTGATGCGTGATCCTTAAAAGTTGTAGTGCGTGAATCGAGATTTCTGCCCTTAAAATTTCGTGACCATCAGACAACCCTTACatgaatacatgtaatttgtctgTCAAGATGGTTCGAAATAGGTCTTCTGTCATTGTTATGTAACGTAATATGCCATTCTcgtttattactgggttgcctttgggcaaacccagtcgaggtctacgtttagtttgtttgttttctttcttttttactgggttgcctatgggcaaacccagtcgaggtctacgtttagtttgtttgttttgtttttttttttttttttcgttttttttttttttttttttttccgtgtcggtaaaagtcttgcctgtcactcccctggtaagtagtgtctttgtgtatagagccttctgcgcgtattttcttaggatcgagagggtagtggaactgcgtagatttctcttgtggacacagtagaatcattaacttagcctgcaatggcgtcgaaagtcatgcaacgcgaatggcgttttagtggatccttaaacaaaatatacccttatggagctcaataatggaaagtcagttggataaactaggcatgaatctcaaaagcgacgagtactggacttcgacaacaatctatcgcccgtcgagacgaaatcaaagtgagcagtatttacgtgaagtacatggtaatttgacacaattgagtttcttgtcttcacgcacgcaatcaaataggaagaggttttcgcctctaagagcaaatatgttgtttgtttcaataaaattttcgctggaaaaggattctgtggtattttctgcctttgtgaattataatatcttgttgtgtattgaattttcgagcttaaggttcaaatgtgatatgggagaagttttttagtattgctctgtaagcaggaagggttcacagcctgttggaagcgtgcttgagtttcaacaaaatgagcccca

Protein

Uniprot

Uniprot term	Description
O95236	Apolipoprotein L3 OS=Homo sapiens OX=9606 GN=APOL3 PE=1 SV=3
Q9BPW4	Apolipoprotein L4 OS=Homo sapiens OX=9606 GN=APOL4 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05461	ApoL	Apolipoprotein L	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008405	Family	Apolipoprotein L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14096	APOLIPOPROTEIN L	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042157	Biological Process	lipoprotein metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14480	APOL; apolipoprotein L	-	Signaling proteins	-	deepkoala