Gene detail

Detailed information of XP_068692017.1 in Montipora foliosa

Genomic Location: chr2:42424660...42439369
NR annotation: KAJ7377441.1, copper transpport protein [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068835916.1

AGATCCAGAACTGGGGGACATGCAGCTTATCAATATACAAGTTAAAACCGTTGCACTCATACAAGGGAACAAAGTTCACACAGATTGACCACAGCATTATTTCTGATGATGACACATGTGAGGTATATTAGCTGAACTCCCATCAACTGCGTTTGACAGCTCCGAGGTACAAGCAGGATCCTTTGGCTGAGTTTTTCGTGGTTACATAATGTACTTCTTCACCACTGGGAATTATACCTTCCTTTTGTTTCGGGAATGGAAGGTGACATCGATAAGTGGTGTCAGTGGGTCATTCGTGGCTGTGCTTGCACTAGCGGTTCTGTACGAGTCTGTTAAAGCGCTGAATGTGACTTTAAGATTACACCACAACAACAGCCAATGGAGAGAATCTTTTCCCAAACGAACACTTGCTAATTGTATGAGGGTAGGCATGGTGAAGCAATGTTCAAACACGTGTCTATTTGTAACAGAACTTTGTTTGGCCAACTTCCTCATGCTGGTCGCTATGACTTACAACGCGTGGTTCTTTTTGGCTGTTGTGATTGGTCGCGGTCTGGGTTATTATCTGATCACTCCACTCATTGCTTCTCACGATAACAGTGAGGAGACTGGCGACTACTGCAGCATTTCACCGgattttcaaagaaagaaacaagaagaTCAGCCATTGGTGCAAAATACAGACGTTTAACGGTCGCCGAAACTTtatcaaacaaagaaatcaCTATTAATGATTAAAAAAGGAAGTGCCCCATGCAACTAGGAAAATTTAAGACACatagttttaaattttatcctcgaattcaaagcaaaaagacACAGGAATGTAACTGTAACAGTCCTTTAGGAgctttaaaaatataaaatgtaatttctggcGTTTGAGTGTGCGAATGAGACagaaatttatatttcaacGACACACAAAACAGAAGGGCCTGGGTTGAATTAGGTGCATGAGGGGTAACATGCCTTCTGTAAAGGTTGAGTTTAGCACGTGCTTAGCAAATCAACTACCGGGAAAATTCCGAAGTCTAATTATCTTTCTTGAGTCTGAGTGGCATTGTCGGAAACTGACCTGGAATTATAAGTGATTTGCTTAAATGACGAATTATGTAATTGTGATTAAGCcggaataaataaattaattagtGAAGGTGTCGGCCTGTGATTAAGTGCGCTAATTTTAAAATGTGCTTAGCCGCATATTGCCTTCAGCCAATGAGAGTTACCGTCGTGTTTTGTGGTCTTTCACTTTGCCAGACGAGATTAAAGTCGTTCTCAGGCCAAGTGGCCCACGCGGCCAGAGTTTTTATtcgtagcatgaagtgactgaGAGTATcgttactcccccctggataagatgctagtccattgcagggctacccccagAAGTAAGTGTTTcaggtacccatttatacacctgggtggagataTACATTTTGGAGTAAAGTTTCTTGTCCAGGGAAACAACACCACGACAGCGCTAGGCCTCGAACCAgcgaccctaaccctaacctaaccacCTCTAGTTGTAAGTGGAAGTTTTTTATCGTTTCGAGACAAtaaaacttgtggtgaaaagagcGAGTTTCTTTCTCGTGTTCCCTGGCCACATAATTAATTGAGATACTCCTTAACCTTAGGGGTTATTAGCGCTGTTCAGGTAATACGCTTCCATTTTTTCCCGCTGgggtttttcggtttttcgCATCCGGCAGAATTCCTAGTTAACATTTAGCTTCATTTTAGTTTctatttagggtgcgttcgattgaccgtattccggaataagaatgcgtggaatataaggtagaaatccttcgcttttacggtgattcacataaaaattgtcaaacatccactaaaatgctattttaaacatatgtttgttgtccttgctgcttcgaagcgcgccaaacataccgttttaatcatcacccctcgtattcttattccggaatagggtcaatcgaacgcgcccttagtgtCATGATATGTATCGAAATGTATGTACGCATATTTTCTAACAGTTGAAGTAGTTCTCTGTTCGCCACTGTTGCGAGACCTTTGTTTGCCAAAATAAACCTATCCGTCTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04145	Ctr	Ctr copper transporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007274	Family	Ctr copper transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005375	Molecular Function	copper ion transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0035434	Biological Process	copper ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14686	SLC31A1, CTR1; solute carrier family 31 (copper transporter), member 1	-	Transporters	ko02000	deepkoala