Gene detail

Detailed information of XP_068693015.1 in Montipora foliosa

Genomic Location: chr1:18196602...18208715
NR annotation: XP_029192779.2, neurexin-4-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068836914.1

tgacgaCGTCGGCCCAACAAACGTGTCGAGATTgacacctctctctccctttatgtctcttgctctgccattttagtgtgagtcttattacaactcccactgagagTTAGGTAATTTTTTACATAAACAAAGATGTCTCACTCGCGCGAACAGGTACAGAAGATATGTTCAGCTATCGGTGTGTTGACGGTCTGCGTATTGTTTGCACTTCAGTATTTTCAATGTTTAGCACACGGCGACCGCATCATCATCTTCAAAGAGCCAATACCAAATATGGCCATGAAAGATCACTTGATCAGTAAAGAAGAGGTACTGAATGAAGGAAGCTGCCGAGTCAACTGCTATCTGCACCCCGACTGTGTCTCTATTAATATGAGGCCGCTAACAGAAGGAAATCTGATTTGCGAATTAAACAATGCCACTGCTCAAAACATGTCTGTCCTGAGTAGCGAAGGAGGTTACACTTACATGGAAATCAAGAATCTCTGCAGCAGCAGCCCGTGTCTGAATGGTGGAACATGTCAAGCCGGATTTACTAGTAAAGGATTTCGATGCCTTTGTACCAATAGTTCCTTTGCGGGAATTCATTGCGAGGCAAAATCGTGCAGCCAATTGAAACGAATGGTTCCTGCAGCAGAGAGTGGAGTTTACATCATCGATCCTGATGGCAAAGGAAACTTAACGCCATTTAAAGTCACCTGCAACATGACTGACAAGAACGGAGTCGGCGTGACAATGATCAGTCACGACAGTGAGGAGAGAACGCATGTCAACGGATATGAATCAGCTGGTAGTTACTCACGTAACATTCAGTACACTGGAACAAGTTTGTCTCAGCTGGCGATGCTCACCAGAGTCTCCTCACACTGTGAACAGTTTATCAAGTATGAGTGTTTTCATGCTATGATTTTTCGCCGCAAAGGTAGAGGAGGATGGTGGGTGTCACGTGACTCAAAAAAGATGTTTTATTGGGGTGGAGCATCTGGTAATGGCAAATGTGCCTGCGGAATGACCAACTCATGCGCAAACTCCAGCTTTGGTTGTAACTGTGATAAGAATGACAAGGTCTGGCGTGAAGACAGCGGTCTCCTCACTGACAAGACAAAGCTTCCAGTAAAACAGCTCAGGTTTGGAGATACTGGACACACCAGAGAGGAAGGTTACCACACACTCGGAAAATTCAAATGCTATGAAATAGAATGATCTCAAGACACTCGGAAAATTCAAATGCTATGGAACAGCATGATCTCGAGAGATCTTATTTTAGTATCTGTTACAACTGTATCACGCACGTCATTTTAGTTAAATTCATGCCACGAAGATGCTGATAAAGTTAGATGGAACACAGTGTTATTCTCAAAAAAACTGTAGAACAacagaaaatataaaatataaatcttAAATCTTTAAAGGAAGCATTCTCCGCTATAAGATGAAGTTTAGTTTCATTTCTCATCTATTCGCATCTCAGTAAACCAACACTAAATTGAAATCTAGAATCATCCAATGAAAATTTTACTGAAATTCAAAaacatgagcctaacagcctctTACTTAAAAGACCGATAAAACGACACGTACATGAGCTTATACcggataaaacactcctcattagaattctttattGCCCCCGCAAGGGACTTTGTCTGCTGAGGCAAATCCCGAGAAGAAATTATTGTAGTCCTCTCCAAAGAATCGAACCCTCTACCATGATTAGACGTCCGAGATTACGTCTCCTCTGTGTTAACCGCTTAGCCATCTATTAAGCAAATGAAATGTGCCAGATGTTGTTTTCTTCTAATGAGtttatagagattacttcatggaaaatgcgcgcgtacgatttttattttacgagttgagtagtatcagaaaactcactcgttcgctgcgctcactcgttcgttttctgatacgaaataacaagtgaataaaaatcgtacaaagcattttccatgctgtaatgcGTTTATTTCGTAGGTACTGAAGTTTTTTTCGTGATAGTGTTTGATAGACAAATTTATTTCGCACAAATGGAGTGGGGcgatgaaagcaaaaaaaaaaaggcttaaaattgcccaacagacaattttttgaaataaaatttacaacactTACTGTGTTTCAGATATTCCAAAGTAGTCCAAAGTGAAGAGTGTTTTTAGTTCGTTGCTTGTCAAAGTGTTGCACACTCAAATCAGAAAAAACGTTTTAAAGCACCAGCTCCGTGCTTTTAACTACTCTCCGAGCATATTGGTTTTTACTCTCTACATTTCCTAGCATACATTGCGGATCCTGAGCTTACAGTCACACAGTCAACAATAACATGTCACGCAGCCTACACACTTCCCCACCAAAATGAAAGTGTTcttcaaaatattacaaaactATTTATCAGAGTTCTCGACACCTATGCTGTAGATGTTGCTTAATCTTTGTCTCTTTCTAGCGTTTTGCGCCTTTATGTGGAATGTTCAGATCTTAGATGAAGTTCCTCTCATGCCCTCTAGTAGTGGGCAAGTTGTAAACAGCATGGCCACACGCAGAAAGTAAAGGGTGCTCCAGGGTGAATAGCTGCCGTCTCTGGGGCTTGGATGGAGTTAACAaactaagggacggaccattagaaaagtgatgggggggtggggaaaaaaccaaaaaaaaattcatgcaagggaaaatgccaagaaaaaaaaaatcatgcaaagaagaaggtaaataaaaaaaaaattcatgcagaaggaaggtccaattgtgacttttatttaataattatataatatttgccagtgtctattaaaaataattcttattcaaaatattcttggggcttTACCCCggccaggccctgctatattattattaataaataaagacatctagtgcactgaggtgttttcctcacactgaatgaaatgacaaattaaattaACACTACAATAGCCAGAAATTCCATTCAGAAATCAACAATATTACCACGCAcaatataaataaacaaaaatcaaTTTCTTCTTATTGAAAGGAGACAATTAGaaccttgtttttgttttaaattgcaGCTAGTGTACCTACATGTACGATATATTCTCTGTTAATACTgtgttaaaataaaaaataataaaataaaa

Protein

Uniprot

Uniprot term	Description
Q94887	Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan