Gene detail

Detailed information of XP_068695246.1 in Montipora foliosa

Genomic Location: chr1:21987745...22010713
NR annotation: XP_029188249.2, coiled-coil domain-containing protein 102A-like [Acropora millepora]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068839145.1

CTCTGTGACCTTGCAGGTCGTTTCGTTTCGGCATCTGCTGATTATTTTGTTCCTTGAGGTCGTCAAAGATCAACGCTTCATGTAACCATCAAGAGGCACCAGGACGTTTCAAAATCCTTATTTATTGCACCAAAAGGACATCAACGGAGTTTGTGCATAATTTTGAATAGTTGCCAAAGATGTTAATCGAGTGGTCGTTTATACCAACAGATTTACGAGGTGACAATAACGGTAATTGACTTTTTAAAGCATGAGAATGCAATATGAAGGCTAATCTCTCCTTTGCATTTTACAATACGTTTGTGGCCGTGGCTTGAAAAGCTGTTTTGTATTCTTTGGACACAGTGGATCAGTTAAAAATCGATGTTAGCTCAACTTTATTACCACTCCGCGTGGACGTCGAAATTGACGTTTGTTTGACTTTCAAGTAAGATTAGCAAACCGCTTAAGATAAACGAGGTACAGAGAGCAAACTTATCCGTCAGATTGGCGAAATCTTGACGGAGAACGTTCTTCGGATTCCTTTGGTAGCTGAAAATTTTCAACGTCAGCATGAATGGAAACTCGGCCATTATACAGGTCCAAGCAGTGAATCCTACGAGACACGAGAAGTCCAGCGGCGATCTTCCAATTTCGTTCGCAGAAACAGAAGATCTGGATGCCAGGGTCGAATTAAGAGAACGAGAACTGGAAGAAGCTCGAGCAAGGGCTATTCAAATGGAAAAGACGATGCGATGGTGGTCGGATTGTACGGCGAACTGGCGCGAAAAATGGGGCAAAGTACGCGCTGAGAGGAACAAAGCCAGAGAGGAAAACAGACAACTTAAGCTCAAGTTGGAGGCTGCAGTgaaagaaatttcaaatttaaaacgCGATAAGATAACAGCTGATGAAATCCAGGTTAAGCTTCAGAAAGAAGTTGAAAAATTAGAGAGAGAGCTTAAGAAAGACAGACGCTTGATTCCATCAGCTCGCGTTGAACCTTCACTTAAAGAGGGATCTCCAGATTTTATCGATGGTGAACGAAAAAAATCTTCTAGCGTTTACGAATCCACTGTACCAAAACTAGGGGCTGAGAAACAATTTATTGAGCAGATACTTTTGAAGAACGAATTTTATGAAGGAAATGCTGAAGATGCTAGTGTATTTGAAAGGAGTCATTCCGTTCCTCCTGATGAGCGCAGGCGAAGCCGGCCAAACAACAGAAAACAGAGATGCGCCGAGGAAAATCCGTTTGACGTAGAAAACTCTCAGCAGTTTATATTAATACGAACGAAACTTGAACAAACAGAAAAGCTTCTGACAGAAGAAAGAAGTGCAAAACAGAATCTTATAGAGGAGTTGGATGGTCTCCAATCTGATCTTACTACCTTGAAGCTGAAAAATGAAGAGCTTAAAGTTTCTCAGCAAGGTTATTCAAAAGAGgtCGCAAGATTAAGAAGCAAACATGAGCAAGAACTTGGAGAGCTCGCCGCTGACTTGAAAGATGCTTATGGCTCAAGTAATAGGTCCGGAAATGCTAGCAAAATCAATGACttgagagcagagGTTGAAAGATTGCAAGTGGAAAACACACATGAGTGGAGTAAACGTGAGAAGCTGGAGAGTGATAAACTGGCCCttgaaagagaaaacaaaaagttgCGACTGCAGATTGAGGATTTGGCAGTTCAAGTGAGTGACATCAGTAAGACATCAAAGGGAAATGTTGACATTGTACAACTGCAAACTCAGCTTGAGGAGAAAAATAGGGAGCAACAAGAGCTAAAGCATGCCTTTACCAAAATAAGAAAGCAGCTCCAAGAAAAGGCAGAGGAGTTAAGTCATTCCAAAAAGAGAGTAGAACAGCATGAGAATGAAGTCAGGAAACTGAGGGCAAGAGTGGAGGAGCTGAAACTTGATTTATCTAAAGCAGAAGATGAGgTTGATACACAATCAAGCAATTTGCGCAGAGTTCAACGTGCATTAGATGAACAAACTGAGCTAGCAAACAGCTACAGAGTTCAAATGGAACATTTAAATTCAAGGTTACGAGTTGGCGTAGTTTCAGGCCCTGCTGCCAATGCCAGACACAAAACAGGAAGGAAAGCACCTATGCAGTTGTCGTCAGATAGTGAAGAGGACTTGTCATTTAAATAAAGATGCACTAAATGCCAAGGGAACCTAATGTGGAATGTTGTCATAAAATTCTTTGCAAAAGGAAGCTGCTTGGTACTGGAAAACATTTTCCATTTACACAGGGGTCAAGTTGTGGGACTGCATATGGCGAATTGATGAACTGAtgttaatttttaaaagaaacttgTTAAGTGAACGTTTGGGCAGTGGTCAGTTTAAAGCAGCTTTTGAAACGGCCTATGAAGAGAATTGGTTCTAGCTAGGTTAAGCTGTGCCGGAGGACTGACATCTTCAAGGATTCCTTGTGGAATAAATGGGTTGCTTATGTGACGTtaaaagtgaacaaaaacatTTGATTGAGTACTGATTTAAAGGAGACGATAAGTCATTTATGGAAGTTAAGATAGGAAGCTTGATGTTTGCTTATTGTTTGTTGGAGTCAGCAGAAATCTTTAAATCCCTTCTACAAATCTGGCTTGAATTTTTGCGTAATGAGTTGCAGGATGCTATACTCTCACTTTTTTCTTCCTGCTTTATATCTTTATCAGATTTTTTATgaagttttaaatatttacTGCTACAATGAGGATACCCGTGAGTATATCAGTAAAGAAATTAGAGGAGCTGTTTATGTATGGAATCATGCTGGTTGACTGGGTATCATTCTCAAGTCtggaaaaataaaatatcatTCAGAAGGAGAGGAGGGCCCTTGTTGGGAAAAATTTTATCCACTGCCTAGAGGACAGCCTCCTGTCTGGTGGAAAATGTACTTCATTGCATAAAATGCCTGTTTGATTGTCAAGAAGGGGCCTATTTTTGAGCAATGACTTCATGTCAACTAGAAGTAGGAATGAAAGAAGCCAGTTCCTTTTACAGtaaaggcggcgaaagacgagatacaaaaaccctcaacttgtcgcgcaacattatttcgttgcaagttttggttgatgtttcgcgtttttcaccttgtgTGGTCAAGCCacgcaacaaagccaaaatttgttgctcagagtagacccgcgctctactttttgcaacaagTTTCTTCAACACGCAACAAATGTTCTTGTTGCGCGACAAGGTGATCATGCAAGGTAAAAAACATAagacatcgacccaaacttgcaacgaaacaatcaGTAACAATGTtacgcgccaagttgaggggttttgtatctcgtatttcgccgccttaacTTTGTAACTTTAACTGTCTTAGACTCTCTTAAAAAAAACCGAATATGAAAATTCAATACTTACAAACTGTTGAATAAAGATCAGTGTGTTACTTGCTGTAATTAATGAACAAACTTGAGGTGGTCAGGgaagaatttaaaaaacctCTGACTTTGAGATTCAATCGCACCTTCCTTCATGCTGTATACCTGGAgtggggcaggtacaaaagtcttACCTGATCAACTCGGATCAagcgaaaaacgtttttgtaaacCAAAACTATTCCAATGTTTTCCCCGATTTTCAGCAAAGTTAGCTTAAAGGGTTTTaaagattagggctagggtTATTCTTGAGACCTCATCATTTCTTTACGTCGATCCTAGGTGAGCGATCTGAGTTGATCTGGCCCGATTTTTGTACCTGTCTTTTTAAACGAGCCAAAGTGCATAGAGTTCTTCTGTTAATGCGAATGCCGGGCCAATTTATGGATTTCAATAAAAGCCGTTTACCAGTGGTCTACTTCTGCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DFL0	Coiled-coil domain-containing protein 102A OS=Xenopus laevis OX=8355 GN=ccdc102a PE=2 SV=1
Q68D86	Coiled-coil domain-containing protein 102B OS=Homo sapiens OX=9606 GN=CCDC102B PE=1 SV=4
A0JNH6	Coiled-coil domain-containing protein 102A OS=Bos taurus OX=9913 GN=CCDC102A PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007174 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01576 all species →	Myosin_tail_1	Myosin tail	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002928 all species →	Domain	Myosin tail	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46292 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 102A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16759	CCDC102; coiled-coil domain-containing protein 102	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.