Gene detail

Detailed information of XP_068697341.1 in Montipora foliosa

Genomic Location: chr3:66481789...66484253
NR annotation: XP_028517003.1, uncharacterized protein LOC114575732 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068841240.1

ATGCGTCCGGTGATAGACCTAAGTTCTTTGAACAAGTTCATTGTAAACGAGCATTTCCAGATGGAAAACCTCAGTTGCCTAAAGACGTTGCTTTTACCAGGCGATTTTATGACAAATATAGATTTAAAAGATGCTTACCTTTCTGTGCCCGTGCACGAGACTTCTCGAAAGTTCCTTCGCTTCATTTGGAAGGGAACTTGTTACCAGTTCAAAGCTCTTCCATTCGGCCTATGTTCAGCCCCCAGAATTTTTACGAAAGCTCTAAAACCTGTTGCTGCATTCCTGAGAAGGAAGGCCATTCGAGTCCTTATATACCTGGACGACTTTCTTCTTTTGGCTGCAACAGTGGAGGAAGCTGTGAAAAATACTCAACTGGTAGTGAGTCTCCTTCAGTCCCTTGGTTTTACAATAAACCTCAAGAAATCCTTACTGACTCCAACACAAGCGATAACCTTCCTGGGTTTCCAAATAGACTCAACATGCATGATGCTATCTCTCCCGGCAGAAAAAACCGACAAAATTCTAGACTGTTGTCACCGTCTGCTCGTTTCTCAAAGTATCACATTGCGAAACCTAGCAAGTTTAATAGGTCTGTTAGAGTCCTCGAGACCAGCCATTTGGCGAGCTCCACTTCACTTTCGTCACTTGCAATCAGACCTGATAAGGGGCCTACAAATGAACCAGGAGTCTTACGACGCCTTGATCGCCCTGTCACCGAGTGCCAGAGTAGAACTTGCTTGGTGGTTGAGACACACCGTCAATGCAAACGGCAGTCCTGTACACCTTCCTCCGCCGGATATGATCATCACAACCGACGCCTCCAAGAAAGGTTGGGGTGCAGTGCATCAATCCTTTCAGACCAATGGCAGATGGTCCCAAAAAGAGTCTCTCCAACACATCAATTATCTAGAGCTAAAGGCGTCCTTTTTGGCCTTGAAAACCTTTCTCAAAGACAAGTCTCACGTATCCGTATCTCTGCAACTAGACAACACTACCGCCATCGCTTACATCAACAACAAAGGGGGTACACGTTCCCCCCAACTTATGACTCTGGCATTAGAGATGTGGGATTGGTGTCAGGAAAGAGACATCCTTCTGATAGCTTCTCACATCCCAGGAAGAGACAACGTCTCAGCGGACAAGGAGTCCAGAGAATTCACGGACATGAGCGAGTGGAAGTTGGACCCAATAATTATTCAGCCTTTTCTGCTGAATTGCCAGACCGATCTTTTTGCAAGTCGTCTAACCAGTCAACTCGCGGCTTACATCAGTTGGAGACCCGACCCGGGAGCCATCCACACCGACGCCTTCACGATCAACTGGGCTACTCTACGGGGCTATGCCTTCCCCCCCTTCAATCTGATATCGAAAACCCTGACGAAGGTAACAATCGACCAAACGGAACTAATTCTGGTTGCTCCAGTTTGGCAAGCCCAGCCCTGGTGGCCGGTTCTGCTGAGACTTCTAATATCCCAGCCAGTGTTGCTCCCGAACAGTCCAACCCTGTTAACGGACCCGACCGACCTGAACCGCATTCATCCAATGTATCCTCGTCTTCACTTGGCCGTGTTTCACATCTCTACCAACGTTTCCAAGCTGAGGGCATTCCAACAAACGTTGCCGACCTACTCATCGCAGCAACTCGTACCTCCACACACAAAACCTACGAGTCTAGTTGGAACCGTTGGTGCCGCTGGTGTTCTGGACGGCAAATTGATCCTCTTTCGTCATCTATAAGTGACATTCTAATTTTCTTAACAGAAGTCTTTAACGAAGGCTTAGCGTACCGATCACTTAACGTCCTTCGTTCTGCTATTTCGTCAACTCATCCAAAGATAGACGGTTTCTCAGTGGGTCAGCATCCTTACGTTACTAGGCTCCTTAAAGGAGCTCTCAATAAACGTCCTCCACAACCCAGGTATTCCCATACCTGGAATGTTGATATTATGATTAAATACATGATTTCTTTGGGGAAGAACAGCACCTTATCACTTAAAGCTATCTCAATGAAGTTAGTCACCCTCTTTGCATTAACCTGTCCTGAGAGGATTTCTGCCTTGGCTTCCCTGGATCTCAGACATTGCAGCGTCCTTCCAGAAGGGGTGTCTTTCAAACTCACTGTCCCCAGAAAATCTGGCAGTGCGGATAAACCAGCTGAAGCATTTTTTGCCCGTTTTGACCAAGACAGGAAGCTCTGTCCCGTGGACTGTTTTAGATACTATCTAAAATTATCTAGGAACGTTCGACCCGTTATTCCGTCTTCTCTTCCTgataagttgtttatttcatttatacGCCCCCACAAACCGGTCACTTCTACAACGTTGGGGCGTTGGCTACGAACCTTTATGAGTGCAGCAGGAATAGACAGTCAAATTTTTAAAGCTCACTCTGTGCGTGGTGCATCTACGACAGCAGCGGCCAATGCATTTGTTCCGCTGTCGACTATCATGTTAATGGCCGAC

Protein

Uniprot

Uniprot term	Description
P27502	Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan