Gene detail

Detailed information of XP_068698294.1 in Montipora foliosa

Genomic Location: chr3:9160754...9176928
NR annotation: KAJ7363701.1, hypothetical protein OS493_009864 [Desmophyllum pertusum]
Species Montipora foliosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P21588	5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1
Q05927	5'-nucleotidase OS=Bos taurus OX=9913 GN=NT5E PE=1 SV=2
Q61503	5'-nucleotidase OS=Mus musculus OX=10090 GN=Nt5e PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002436 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02872 all species →	5_nucleotid_C	5'-nucleotidase, C-terminal domain	Domain	Interproscan
PF00149 all species →	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008334 all species →	Domain	5'-Nucleotidase, C-terminal	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR036907 all species →	Homologous_superfamily	5'-Nucleotidase, C-terminal domain superfamily	Interproscan
IPR006146 all species →	Conserved_site	5'-Nucleotidase, conserved site	Interproscan
IPR006179 all species →	Family	5'-Nucleotidase/apyrase	Interproscan
IPR004843 all species →	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11575 all species →	5'-NUCLEOTIDASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009166 all species →	Biological Process	nucleotide catabolic process	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19970	NT5E, CD73; 5'-nucleotidase	EC:3.1.3.5	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068698294.1 across 36 RNA-seq samples of Montipora foliosa. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

22TPM > 0

1Conditions

4.9Max TPM

1.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	22	1.35	4.88

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR12959226	Polyps	Polyps	E4 day3	not recorded	SRP199550	4.88
SRR12904792	Polyps	Polyps	not recorded	not recorded	SRP199550	4.73
SRR27940179	Polyps	Polyps	not recorded	not recorded	SRP199550	4.66
SRR27940180	Polyps	Polyps	not recorded	not recorded	SRP199550	4.63
SRR12904780	Polyps	Polyps	not recorded	not recorded	SRP199550	4.58
SRR27940177	Polyps	Polyps	not recorded	not recorded	SRP199550	4.30
SRR12904791	Polyps	Polyps	not recorded	not recorded	SRP199550	4.21
SRR12959181	Polyps	Polyps	E4 day0	not recorded	SRP199550	3.59
SRR12959237	Polyps	Polyps	E4 day0	not recorded	SRP199550	2.76
SRR12959238	Polyps	Polyps	E4 day0	not recorded	SRP199550	2.29
SRR12959224	Polyps	Polyps	E4 day3	not recorded	SRP199550	2.05
SRR12959225	Polyps	Polyps	E4 day3	not recorded	SRP199550	1.54
SRR12959213	Polyps	Polyps	E4 day9	not recorded	SRP199550	0.91
SRR12786904	Polyps	Polyps	OA4 day0	not recorded	SRP199550	0.60
SRR12959199	Polyps	Polyps	E4 day15	not recorded	SRP199550	0.53
SRR12786895	Polyps	Polyps	OA4 day0	not recorded	SRP199550	0.47
SRR12959212	Polyps	Polyps	E4 day9	not recorded	SRP199550	0.44
SRR12710852	Polyps	Polyps	OA4 day9	not recorded	SRP199550	0.36
SRR12959200	Polyps	Polyps	E4 day15	not recorded	SRP199550	0.36
SRR12959198	Polyps	Polyps	E4 day15	not recorded	SRP199550	0.36
SRR12710853	Polyps	Polyps	OA4 day9	not recorded	SRP199550	0.27
SRR12710865	Polyps	Polyps	OA4 day3	not recorded	SRP199550	0.09
SRR12710845	Polyps	Polyps	OA4 day3	not recorded	SRP199550	0.00
SRR12710854	Polyps	Polyps	OA4 day9	not recorded	SRP199550	0.00
SRR12710866	Polyps	Polyps	OA4 day3	not recorded	SRP199550	0.00
SRR12786903	Polyps	Polyps	OA4 day0	not recorded	SRP199550	0.00
SRR12807380	Polyps	Polyps	OA4 day0	not recorded	SRP199550	0.00
SRR12849112	Polyps	Polyps	OA4 day0	not recorded	SRP199550	0.00
SRR12927879	Polyps	Polyps	E4 day0	not recorded	SRP199550	0.00
SRR12959185	Polyps	Polyps	E4 day21	not recorded	SRP199550	0.00
SRR12959186	Polyps	Polyps	E4 day21	not recorded	SRP199550	0.00
SRR12959187	Polyps	Polyps	E4 day21	not recorded	SRP199550	0.00
SRR12959211	Polyps	Polyps	E4 day9	not recorded	SRP199550	0.00
SRR12963483	Polyps	Polyps	E4 day0	not recorded	SRP199550	0.00
SRR9129315	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613518	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MFOLI_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.