Gene detail

Detailed information of XP_068698486.1 in Montipora foliosa

Genomic Location: chr1:32419037...32443828
NR annotation: XP_029191058.2, alanine aminotransferase 1-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068842385.1

ATGATCACACAACACACCACAATTATTACTCCTCCATGCCACGTAGACAGTCGTTAAGGGAAAATCCTGTCGGTCAAAAAGCGTGCGAGAGACTCTAGGTTGCGGACAATTCTTTCCGAACACAAAACATTACAATCGCGTGGCAAAATGAATCGAAACGGAGAGCAAGTAAGCCTAAATGGAAAACTTCCAATTTCAAGCAAGGTTCTCACTGGAGAAACGATGAATCCGCACGTGAAACAGATTGAATATGCGGTGAGGGGAGCCATCGTGGAGAGGGCAGGAGTTTTGGAAAAAGAATTAGCACAGGGAGCTAGCAAACCATTTGAAAAAGTAACAAAAGCAAACATTGGAGATGCTCATGCTCTTGGAATGGTTCCTCTCACGTTTCCTCGTCAGGTCATTGCAATGTGCGTGTGTCCAGAACTTCTGGAAACTTCAAACTTCCCAGCAGATGCAAAAACTAAGGCCAGAAAAATACTGAGTCATGCCAAGGGTTATAGCATGGGTGCATACACAGATTCGCAAGGTATTGAAGGCATTCGTAATAATGTGGCTAAATATATCAGCAACCGTGATGGCTATGATGCTGATCCCAGCACGATTTTTCTCACAAGTGGAGCCAGCCAGGGCATAACGGGAATTTTGAAACTGCTCCAGACCGGTATCAACACAGGAAATGACAGAGCTGGCATAATGATTCCTATCCCTCAGTACCCCTTGTACTCAGCCACACTGTCTGAATATAATTCCTACcagATCAATTATTATCTTGATGAAGCCAATGGATGGAGCTTAGACATTGGAGAACTGAGAAGAGCTTTGAATGAAGCAAGACCACACTGTGTTCCTCGTGCCTTGTGTGTCATCAATCCTGGCAATCCCACAGGTCAAGTACTTTCCTATGATAACATCAAGGATATCATCAAGTTTTGTCATGAAGAGGAACTTGTTCTACTAGCAGATGAGGTATACCAAGCAAATATTTATGGAGAGGGTCTGAAGTTTCACTCATTCAAGAAGGTTTTGAGGGATATGGGTCCAGATTATGACGAATTTGAACTGATCTCTTTCCATTCAGTATCAAAGGGATTTCTTGGAGAATGTGGCTTCAGAGGTGGGTACATGGAGGTTGTTGGGATGGATAGTGAAGTTAGGTTCCAGTTGAAGAAGATGATTTCAGCATCACTGTGCTCTAGTACCACTGGCCAGGCTATGATGGATTGTCTTGTCAGTCCCCCTCAACCTGGAGATGAGTCCTATGAAACATATCTCAGTGAGAAAACAAAAGTTCTTCAGTCACTTAAGGAGAGAGCCAAACTTGTTGCTGAAACATTTGACTCAGTAGATGGAATTCAGTGTAATGAGGTCATGGGGGCTATGTATGCCTTTCCACGCATTTTTCTGCCAAAAAAAGCACAAGAGGAAGCCAAGGCTAGAGGTATGCACCCAGACAGTTTTTATGCACTTGAGTTGTTGGAAAAGACAGGGCTGTGCGTGGTGCCAGGAAATGGATTTGGACAGAGAGACAGAACATTTCACTTTAGATTGACAATTTTGCCTTCAATTGATACTCTGAAACCTCTACTTGAACGCTTCAAAGTCTTCCACCAAGATTTCATGTATACATACAGGGATGAAGCTAACTGAAGTCTGTGAAAAAGATACATAAATGGGGCAAGCACTGTCAGTGGCTTTACAGCAAATGAATTTCGTCAAAGTTAATGATGCTGAAGAGGTTAAGGAAAGGATACACGAAAAAACAGCAGTTCTCTGATGTTTACTGGTTCACAATTTAACAATGGATGAGTGGTTGTTTGTTGACAAGGAGGACTTTGCCAAAAGTTGAGACATATTTGCATGCACGGCAAGTTGATGTACTCATCATTGTATGGACACTCTAATCACATGGCTCTGTTTCCAAGACAGTACAGGTGCTGAAAGACTACAGGATAACTGAGTTCACTTCCTTGTTTTCTCCAgcagttattttaattattgcTTTAAATAATGTCAAGCATAATGAATGAGGTGATTGCAATTTTGGACTCCTAATCTCCAGCTAAAGTTAAAGAATGTGTCACAAATTTTCTGCACCTTGCTTAGGACTTTGCTCCTCAGTGGAAAATTTAAGGCAAATAAGGAAAAGCAAGCAGGGAACCTGAATTTAGGACGTCTTATCCCTCCCCTGCCTGCTCATCAATTCTTTTACTTAATAAAGAGGCTGTGTCACAGCATTGCAAGttctttttctgttgttttacCATTTACTTGCATGTTCTCACCATACAACTTAACACTAACTcataaaataactttaaacagCTCAAACCAAAGCTTCAtgaagaaaatttgtttttcaagcATACATGATTCAAGTTACAAGTAACAGAgatcaactttgaaaaactgtttggCTGAAGAGTTTTCAAAATCCCCAATCACAaaccattttaattttcttccatttATCTTTTTGCCAATCCCTGCCTCCTTTTGGATTTGCAGTGTTATTCAAACGGTCCCTCAATGTTGTAAGGGAATTATTTTTACATTTCGCTTTCaagatttggttgccagttgcCAGTCGCTGAATACACACTGTAGTTGGCTAAATTTCGTGACACAGTCCCTTTAAGACTAAGGTTTTGTGAGTATTTTAacattgtaaatgtaaatgcgtagtttatagtggaagtgcgcTTAGCTATCAAGGTAGTTCACAGACACCCCACTTAAaacaatctgaaagaaacaattcaagcttaacagaaacatgattaagaaggtccccaactggcaggaggcaaccagttggcagGGTCAGCCAGGGTttttgggtatacggtatacaggGGCTTTTAAAATCAGGTATACGGTATATTGCAGCTTAAATAAGGGTATTTGGTATATCAcattctttgaatttcaggtatacagtatacaatgcttccatt

Protein

Uniprot

Uniprot term	Description
Q6NYL5	Alanine aminotransferase 2-like OS=Danio rerio OX=7955 GN=gpt2l PE=2 SV=2
Q28DB5	Alanine aminotransferase 2 OS=Xenopus tropicalis OX=8364 GN=gpt2 PE=2 SV=1
Q6GM82	Alanine aminotransferase 2 OS=Xenopus laevis OX=8355 GN=gpt2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR045088	Family	Aminotransferase ALAT1/2-like	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11751	ALANINE AMINOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0004021	Molecular Function	L-alanine:2-oxoglutarate aminotransferase activity	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00814	GPT, ALT; alanine transaminase	EC:2.6.1.2	Amino acid related enzymes	ko01007	deepkoala