Gene detail

Detailed information of XP_068699083.1 in Montipora foliosa

Genomic Location: chr3:25877399...25881548
NR annotation: XP_029211229.2, latrophilin Cirl-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068842982.1

GCCTCTGAGGATCATATAAAATTAATAAGCAAAGAGTGCTTGCAAATGCCAATTAGTTTTAATGCTGACAAAAAGAGAGCGCTGTCGAACACGCAGCAGTGTCACAGAACTACTTCCTTGTATTCAGTGGCAGTAAACGGATTCAAGgccattttgtaataactatacTTTAATCCTCTTTCATAGAGAGCATTGCTGTGGAAACTTGAAGTTGTAGAGCGGTAACAAGTGGCTAGAGATGACTTTCTCTGAGTGGCTTTTGCTATTTTTCATATCCGTCATTCCAACATTCACCGGAATTGGTGCATATAAAGTAGATATAAGAATGATGCGTACCAGGTATGTTTGTGAAAATGATGTCATCAAACTAAGATGCGACAAATTCAAAGTCCTTAAAATTCACGGCGCCGACTATGGCAGAGGAGAGGACTCAGTTTGCAGGAAAGATCAACGATCAAACTACACATGCACATTGGTGGACAAGACACACACAGTGAAATCGCGGTGCGATAATAAACGGAAATGCACCATCGAAGCGTTGAGTTCCATATTTGGTGATCCCTGCCCGGGgtttaataaatatttgaacATCATGTATGTCTGCGTGAAACGGAGGCACACTGTAACTCCAGTCACCACCACTGCCACTAAAACACCAATATCGACAGGTGATAAAAATGCTACCATGGAAGTTACAACCACAATCACCAAACCAGCTGCAACTTCCACGCTCTCAATTACCGATGCCTCTGAGGATGTCCTAACCACCAATCAGAgtaacttgaaaaatatttctacAGCTGCAATTGCAAACACCACAGGAAAACTTGCAACTTCCGAACCAACTGCGGCAATCGCAGACACTGATGGTATCCTAACCACACAAAGTATCTGGATTAGCATTACTTCAATGGCACAAATAAACCAGCAACCAGCAACTAGGAGGGCCATTTCTATTACTGCAGCCATCCGCAGTACTTCAATTAAAATTTCTACTACCCCTAAGAATCTCGACAGACTTACAGAAACTAACGAATCATTTGCTGTTCACAGTTATGGGACTAGTGGCCCTCCTACAACTGCGTACACCACCCAGCCACGTGCAACTACTGAACCAACCAAAACCAAACAAGCGgaaccaaaacaaaaggaagatttCGACTCAGAAAGAACTATCCCAATATGTGATTCATCTAATGCAGTAATCTTGGAATCtttttctggttcagccagccAACCAACATTTTTTCCTGATTGTGGATTTTGCACTTGGGCTTGCTTTTTAAACTTAGTCGCCATATGGTGGCCATAAACTGTCAGAAGCGTGCCGTTGGTTACAACTAAATGAATGAGTCATAACGAAATTACAATTCGAAGAGTCTTTTTCTGGGTCATTGAACTGTAACTTTGTTAAGTTATTTTCGATTCCAAACCGGAGTAGTTGCAAACTACTACTTATTGTACACATGGCTACCCTATGATATGAACTTTAACTTGTCTTAAATGATGAATGAGTTGTGGCTTGTCTTTTGTGATCATAATTTGAGAATTTCCGTCATTTGTAATGTAAAGAATATTAAGGCCTTTTTGTCTCTCCATTTTGGAAACAAGCTGATTATAATAACAATTGAGATAATAATGAATCAAGGGATTGCGACGCAAGATGAGCTGGAGGTCGTCCAAGGCCGTGGGAACTAGGAGTGGCCTGATGCCCCTGTTCTTCCAGCGAAAGctgtgttgaaaaacaaataataacaacaacaataataatgataataatgataataataataataataataataataataataataataataataataataataataataataataacgataaatTTCTTGCGCTCTAGAAAAACATTACTCAGGGTACCAAACATCGGAATATAAAGCCATTTCCGGATATAGCCGTTCACTAGAGAATAGGGATTTGGGTCTAGATAGGACATAGCCGCTGTACAGCAGAGGCAAAAGCCGCTTCGCGCCTCgctaaatatccaccactagccaccgacactgaggtgaatattTGTtctagtatatactaaaacagtgagataatatagcacaaaaagatgattttaagctatctattcctgcaacgattacagtgctttcgggcgcaaatccccgCGAATTGCTAAAAGatgaatagccaatcagagcgcaccttcaacgctatccactgctCTAGTATAATAAATAATGCCATCATTAACAACCAGGAACATTCATCATGGCTTACAAGATACAAAATAAAAGAATCTTGCTATATTAAAAACCTAACTAAAATATACGATCGCCGTGTATACGTAAACTACATCAAAAAATACGCAATGCGTATATATGGTAAGCCACTAAGGTAGAAGAGGAGGTGCTGGAAACAAGTGTTTTTGAGCTATGCTTAATTAAAATCCCAAAATTTGAGAGCGATACTGGATGTGCAGAGAAAGACGTTCACCACAATTCTTAAAATGCATATGGTCCGTCTGAGATATAGTCTTTGGAAAGAGGATGAAAAACTGTCTCATAATCCTCTCTTagattttatttcatttacttGTTTCTTGCTTATGTTGTTTCAAAATCACTAACTGACCTTTTAAGCAATAGCAAAACCATCTTGAATTTCGCATTTGGTACAATCAATGGGCTTGTTGGCCTGGATAGACCACAATGCATCAGGACTCAAGATGTCGTAGCTATTGTAAAAAGGTCAATTTCACTGACAACTATATAAGTCAGAAACACATTGTTTTCCTGCATTTGATCCAAACACAGATTCGTTACCTTGA

Protein

Uniprot

Uniprot term	Description
C0HK23	L-rhamnose-binding lectin SML OS=Scomberomorus niphonius OX=321164 PE=1 SV=1
P86179	L-rhamnose-binding lectin CSL3 OS=Oncorhynchus keta OX=8018 PE=1 SV=1
Q9PVW8	Rhamnose-binding lectin OS=Silurus asotus OX=30991 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02140	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000922	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46780	PROTEIN EVA-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25535	FGFBP; fibroblast growth factor-binding protein	-	Signaling proteins	-	deepkoala