Gene detail

Detailed information of XP_068700236.1 in Montipora foliosa

Genomic Location: chr3:60180256...60243491
NR annotation: XP_044168430.1, mitochondrial division protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068844135.1

TTATGATGGCCAACGAAGAAGAACAGCTCAGGGTCACTGCTGTCGAACTTCGAAAATTCAGGAAAAAGCTTCGTCAGATCGAAAGACTTGAGGAACTAGAACGTGACCTTACAGAGGATGAAATCGTCAAGCTTTCCACAAAAGATGAACTGCGCTCCAAAGTCCAGGAGCTTATAGCAAGGGCTGATGTATTGACACGTGAAAAGCAAAATATGGAAACTGAACCAGTTGAAGAACCTGCAAATGAACAAGAAGAAGAGAGAATGACTGAAAATTTACAAGCTGTTGTAGAAGATAATCCTGGCAGCAGTCACTATGCACCGAGTGAAATTCGTGAGCAGAGTAGAGAGGAACCTGTGACAAATGAAGCATATGACCAAGCTCCTTTGTTGCAGCCTCTACCCGCTGTCACTGCACCAGATGTTGTGTTAGAGGCCCAGACTCGAGCAACATCAGTTTTGGCTTCTGATAGCACGACCATGAGATTTCATGTTAGGAATTTTGAAGGCCACAATGATGTCATTTGCAGTGTTGACTGTCAAGGATCTTTACTTGTGTCTGGCGGCCGCGACACAATGCTGAAATTATGGGATGCAGACAGTGGCCGAGAGACTAGAAGCATGGGTGGGCATACTGGAACCATAACATCTGTGTTCCTTGTGCCTAAGGAAAAAACGTGTGAAATCGCTCCACCGTCCGGCTTCCGCGCTGACCAATACTCGGTACTCACGGGCTCAAAAGATTGTTCCATGAAAATATGGTCCCTCGCTAACGGGCAAATCACAAGATCGATGTATGTATTTTCGCCTGTGGAGAGTTTGGATTGTAACTGTAACAATGTGATTGCAGCTGGTTTAGatggTGGTAAGGTAGAGTTATGGGATCTAGAGACGGGAACGTCTGTGAGGTCCGTGCGAGGACACGACGAAGATGCTGTTACGGCTCTCAAGTTCCAGGACAGCCGCGTTGTCAGTGGCTCTGCTTCTGGGGTGGTAAAAGTCTGGGACGTTAGGGACAATTCTCTCAAGTCAGTGATGAGCTCAGAACATGCCTGTGCTGATAACGCTGCCGGAAACGTAACGGTGAAACCGAGACGCGTGCGTTGCATAGCAACAACACATGACGCGGTTTATTGGGGAGATGACGGAGTGAACATGAAAGCGATGGATTTAAAGACAGGTAAACTTCGCAAGATTCGTAATCACGTGACAGAATTTGGATCTACCGGTGCCATGGCAACTACAGGCACGTGTCTTGTGAGCGCGGGCTATGATTTGGATCGCGGAAATGGATACTTGAATGTTCGTAGGCTTCCCTCCGAGGAATACGTAGCGACCGTCGATGACGAAAACACTGGTTGTATCACTTGCTTATCGTGCACTGAGACAACACGTGACAAGGTGACGCTCCACAGAATGTGCACAGGAGGAATGGAACTGAAAGTCTGGGATCAGCTGCCGAGGTCAAAGGTCAAAAAACGTGCCCGACCAGAAACCGATGACGTATACATCACAGCCAAACACGTTCGCCGTTACGGTCTTCCCGATGTCAGTGACACGGAGAGTAGCGAAGAAGACGATGACCAACCCGAAGGAGGCGACtccgatgacgatgatgacgtcAGCAATGCCGGGAGTACATCACGGTCTTGGTGCACTATATCGTGATGTATGATAACGTGACAAAAAGTCGCCAATATTCGTCATGCCATGGCGTTGTGCGCACAAACCAAGCTGCTCGATTTGGGGTGTGATGTATCGAGAATTCCTGAACTCTACTCGTCGAGTGGTTTTGCACAGCATCGTCTACTTTTTCACTGCAAATCAGAGTCTCAAAAATTGACTCGAGGACGATACTTTTCATAGGGGTACAAAGTAGAGATCCGAAATGTTTCCTTAAATCTCCCCGACGAAAGAAAATATTCGAACGGAAGGAGACATGTTATGAAAATATGGACttgaagatctacgacggcgaagTCAACCACgatgtcacctcaaaatataaatttgcacTATCGTAgttctttcgcgattattccatctcgttaaCGTCGTACAATATGGGCAAatcattcaagaaaaat

Protein

Uniprot

Gene family

Uniprot term	Description
A7TNS8	CCR4-associated factor 4 homolog OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=CAF4 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19855	WD40 REPEAT PROTEIN 12, 37	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan