Gene detail

Detailed information of XP_068702853.1 in Montipora foliosa

Genomic Location: chr4:24303220...24318149
NR annotation: XP_015768366.1, PREDICTED: uncharacterized protein LOC107347014 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068846752.1

ACGCGAGCTTTTCTCTGTGGATTAGCATTGGAATTTTTTCCCGTTTGCGGTGTTTTATAAGGGTCCATTCGGTGCGCACATCACTGTTAATCGATTTGATCTCCCAAGAAAAATGTATCTGGCGATATCGCTTTTCATTCTCTTTGCGAGTATTCACACGAATACTGTTTCCGGTTCATCGCATCATTCGTATCATGTTGATCCAGTGCTTATCCCGATTGGAGACTTCGGTCCTTCTGGTTCTCAGAATGTCCATGTGAAGGCGTTTTCTGGAAATTGTACCGCTAATATCAAGGGTTTGTTACGCATGGAGGGAATGGAGTTGCAATTCTGTGACGGGCAACAGTGGGTTCAAGTTGCAGGCCATTCAACTGTGGCGAACAGTGAGACAAATCCAGCCCTTAGCTGCAAAGATCTCAAACACCGTTATCCTTCTGCTTCAAGCGGTATGTACTGGTTGAGGCCTGATCCCGCCAATCCTCATCCTTTCCTGGCATATTGTGAGATGAAGGCATTTCATGGGGGATGGACCATGTGTTACACCACTGATGACAAAGCAGATCCAAAGGACCAAATCGCGTTCAATCCCAACAAGCCTTACGGGACTGATGGGTACAGAACGAACTGCAACTACATCCCATTTACAGAAGTCATCTTTATTGATCAAAACACTGATCACAAAGCCTACTTTAGTCGAGTATCCGAGGCACCGCCCATTAAGGCCGAAGCTCATTATGGACAAGTTGGCAGCGCCTTTGGATTGTGGGAAGGTCACGGAACTGTTAGCAGTGCATATACGGGGGATTATCAACTGTTGATTTGTGATCACTCCTTCTACAGTGGCTTTTTTGTGAGCGGTTTCACTGGTAATTGTTACAAGCAGTGTCACCATTGGTGTGGTGATACTTCCTCACCCTACTTCCGTACCGCGGCTAACCATGCAAGTTACGATGGAGTGGCTTTTAACGTCAACGGTCATGCTCCAAACAATGTCCCAAACAGGCTAATGAGCGTTGGAGTGCGTTAAGACATCACCATTCGTTCCAATACGAAGgaacttttgttttgtatttttgaagTGGTACTCTAATCATAAAGGCATTTCAAAGTGGTTTAAGTTAGAGTTAGATAGCAATGGAAACCACCTCGAAAGGGTGTAATTAGGGAGTGTTAGAAACGACAAAGGCTGCGGTAACGACAACTCACAtagcaagaatattattagtcaaaaaaagggaaaaatgatCTTGCAGCACGCATTTCAGTACATTTTTAGTGTAGTCCACAaaacacaggggcacccaacgaccaatttgttgtaaaatgtattattataccccagttaatgaaaataaatgttattaaggcattttcaggtgtttttcagtgttgctgggaaaacattatctgttcctttttcccagcaagacacacaagaaatttcccagccagctagataagattagttggtttcccagccacctgatcaaatttatttcccagccaggaattccgcgcgctttcaaatccctcgatccaaaacgaccgaacaaagcgacaaaaccgggacaaaacaggctttttccgcaagcgcaatcactctgaccagccgtcgtacgTTTGTGACTAGGGAacaggttcttttttttttttttttgagtcgTCCTCAGTTTTCATAGTTTCTACAGCCAGTtcggattgaaatgctagaaaaagtcattaattcccaggcaaaacctctatcaataacaaaatttcccagccagctcatcgaaacacctgtatttttgccagccagcaagtttcctctggggaacagataatgtgaggaaaagattcgttgggtgcccctgaaaacaACACattgaaatcactaaatttcaggttttgacaACAACCTGAACATATACCAGTGCCGGGAATCGTTcatttttttatcttcactttagaACCGTTCGTACAAATCTAGTGATATATGATAGTTCACCTCCAATTGTTACTGCAATtgtcataattctgcggaatttatcttcaagcgccaacggaccaactgcgttttggcttccatcaatcaaacttccgacgccAATGCAACCAAAGTTGGCGAAATCAATTGATACGTGACATAACCCatcaatcagcatctttggttcccacggtatATTCGTACATTCGATCTAGACGCCGAgggaaagcgatggaatctgtGCGAATGTTTTCAATTAAGAATTTCTAAATACATATCACAATGGTGTTCGAACTGTGAAcgaaacaaaaactccaattcactttttTGAGGCGGAGTCTATCTTCGGCCGGCTGtattcggaaatttgattgatggaagccaaaacgcagtttagCACTTAgcgcttgaaggtgagattccgcagaattatggaATCATCGCAAAATACTTTTTGTAGCgctaaattatattttgaagtgaagttTTTGTTGAAGTTGCCGTTGTCCATGTTAAACTCCCTATTCGCTATTTTCACCAGTCCCATAATACAGCTCATTTTTGGGGGGAGgaggaaagattgcgtgacgattCACAAGAATGTCTGCGTAGGAGGTTATGACTGTTGCATTATAAGGAAAAAGACATGTTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan