Gene detail

Detailed information of XP_068705085.1 in Montipora foliosa

Genomic Location: chr5:20894718...20897712
NR annotation: XP_044163500.1, uncharacterized protein LOC122947934 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068848984.1

aagctCTTGTCAATGTTGTTTGCAATTCGCTGGGTATCTCAACATCGAGCACTGCATCAAGGACGGACTCGAAATCGATTCTTGTTGGCGAGATGCAGGATATCTCCTCTTCGAAGATACCTTCGATTATGGAGCTCCAGAAGCTAAAAGAATGGAAGAAAAGCTTGCTATCTATCCTGCAGCTAATGGATGAGGCTCTTGTTAAGGAATTTTTGCTTGGGGTTGGTTACTGCCAAACTGATGTGAGAAAGTACAAGACCCTTCGAGCTTGGCAGCACAAACAGGGAATTCACTCAGTTAAGGTTTGTTCTTTGCCAAAATATCCTACCATGTGGGCCTTAAGGGGATGCTGCAATCCATCGTTTTCCACTGACCCAGAGGAAACAAAGATTGTGTATATAGTGCTTGAGAAAGATACCAGCAAGCCTGTTTATGCTTACTGTTCTTGCACTGTCGGATTACGAGGTGACTGCAGCCATGCTGGTGCTCTGTTATTTGTACTTTGTGACATTGTTTCTCAAGGTAAAACCACCTTGCCAGCAGATCCAACCTGCACAGAACTTCCTTGTAGCTGGTCAAATCCTAAAGGTACCTCTGTTGATCCAATAAGGATTGAACAAATAcatttttataaatcaagaTTTGGTGAGCAGCCTCCAGCAAAGAAATTCAGTGCAACCCCGACAGTCTCAGAGCAATTTTTTGGAGTTTCGAGAAGTGATGTAAGTGAAGAGACTGTTAAACAATTGAAGCAGAACTTAAAAATGGCCATACTTGCTGCCAACAATGACAAGTCCATGCCACCTGTTTATTATCTACTAAAGCCCAAGTTCATGGAATCTGAATGCACATTTGCTGAAACCCATGAGCTACCAAAAGAGCTGGATGAGGATGATCCCAGAATGCTACCCAGTTATGCTACTGATGTTGAAGCCACTCCTTCTGTGCAAATATCCTCTGACAATGTTTCTCTCCCACAGATCATGTCAGCTCCATGTCAGAAAACACCCGAGGAGAACACAACTCTATTGCCTGTGATTTCTCCAGCTGAACAGTGTAAATCTTCCAAAGAAAGTCGTGTTCCCTTGGTTCCTGTTACATTATGTGAAAATGGCACATTTGAAGAAAATAGGTTTCAAGCCCCGATTACCTATCCAGTTCAAATTCCTTCAATACCTCCCCTGAGTGACAGTGCTTTTGAGTTCTACAATAACAATGTCAAGGTTTCAATTCAGCAGTGCtgggaaatcgaaaaagaaactCGGCCTCAATCTTCTAGTGAGCTTtggtttaaacaaagaaaactcagATTGACAGCTTCTAATTTTGGAAACATAATTAAACGTAAAAAGGCAGATGTGTCAAAACTTGTAAACCGCTTATCTACCACTTGTGATTCTTTGTCTCACTTGAAGGCTATTAGATTtggcaaagaaaatgaagatGTGGCTTCTCAGCTCTACATGCAATATCAAAATTCACATGGTTCTCCTGGAACTAAGGTTTTTCACTGCGGCCTTGTAATTACCAGTAATCCACACTTTCCATGGTTGGGAGCTTCTCCAGACAGGCTAGTTTATGATCCCAATGCTAGGCCATCAACTGGTGGTTTGGAAGTGAAATGCATTGAATCTGCGCAGGGGATGACACCATTTGAAGCATTTAAAAGTAAGCAAACTCCAAAAGAAGGTAAAAAGAAATCTTTCTGCCTGAAAATGAAAGATGGCCATCTGCAGCTGAATGAAAATCACAATTACTTTTACCAGGTCCAGGGTCAAGAAGGAGTATCAGGAATAAAATGGtttgattttgctttgttgaCAGATCCTCGCCTTGGCTTAAATGGATTGTTTGTACAAAGAATTcactttgaaaaaaacaaatgggAGTCTGAGTGGCTGCCAAAGCTTACAGATTTTTATTTCAACCACCTCCTGCCTGTTATTATCAAAGATAATTCTTCCTTGTAGTTATCACTGTTGTTACCTTTTTTATTAATATACATGGCTGATTTTCTGTCATGATTTGACAAAACATGGACTCTCCCAACCCACTGGCATCAACGAAAATTGAAGGGGAGTCTCTGTCACTGGTACCTGGGGGGGTAAGTTGAGCCTTATGCCATCTGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR051703	Family	NF-kappa-B Signaling Regulator	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18080	TNS; tensin	-	Protein phosphatases and associated proteins	ko01009	deepkoala