Detailed information of XP_068706473.1 in Montipora foliosa

Genomic Location: chr5:33775675...33796303
NR annotation: XP_029208582.2, DNA polymerase beta-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27958DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3
Q8K409DNA polymerase beta OS=Mus musculus OX=10090 GN=Polb PE=1 SV=3
P06746DNA polymerase beta OS=Homo sapiens OX=9606 GN=POLB PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR003583DomainHelix-hairpin-helix DNA-binding motif, class 1Interproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02330POLB; DNA polymerase betaEC:2.7.7.7
EC:4.2.99.-
DNA repair and recombination proteinsko03400deepkoala

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