Gene detail

Detailed information of XP_068708482.1 in Montipora foliosa

Genomic Location: chr6:885080...897858
NR annotation: XP_015776019.1, PREDICTED: neurogenic locus Notch protein-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068852381.1

AAGTAAACAAATGAGGAACTCATTTCCAAATCAGATTTGCTCGTAAATTCAGCTGTATCATTAAAATATTTCGCAAGAAAACTCAATTTGTTTCTTGGGCTTTAATTTATAGTTATTCTAAACttaatatattaattttaaaaatatagtTATAATAACCCGTCCTTTTCAACACCTAGATGCAAGAATATCCAACGAAAAATACAAACCGAAAGAGTAAAATTTGACAACAAAGaacaaataaattttaaattatttgttgCCAAATTATCGTGCCTCTTAAAAGAAACAACGATTAGCAATAATTAAGACAACCACTCTTTAATGAAGTAATATGGGTACCTGCCAAAAAGAGAGTCTCTTTGAATAAACTCTGACCCATCTCCCAAGGTATCACTTTTCATTGGTTCAAACTCAAAGCTGTGACGTCCAATGAATTCAAATATTCACCGACTGGTGTTTTAAAGGACACGCGATATGCAGCCAAGTGCGTAAGATTTTGACAGAAAGCGTCCGGCTACGTGCACAAGGCAAGTGACTTCATATTTTTTCCTTACGAAGTCTCCGAATATCTGCGATCATAGCACAAGGCAATGGGCCCCGTATTTCATTTGTATGCTACCTTTCTCCTCTTCGGTTTCAAAGTTGTCTCTACCTGTCCAGACGGTCATTGTCGAGAACTTGTCTTCCCACAGTTCTTCGTCTTTGCGCACAAGCGTCTTGTGAACCATAACATTGAGACTTTGCAGGTTAACGATTTCGACATGTGTCGGCTGCGATGTTACCAGGAGCCTAACTGCGTCAGCATTAATTTAAAGTTCAGTCGAGACAGCGAGGGACTTCAAAACTGCGAGCTGAACAATGCCACTCATCAACGCCATGACAAGGAGCTGAAAGACAAAGCGGATTACTTCTATCGCGCAGCGCTGAACGCTTGTAATAAAGCTCAATGTAAAAACGGAGGCACTTGCCTGTCTGGATTTACAGACAAAGGATATTGCTGTGTGTGCCCGCTCGGGTTCACCTCGGCTCATTGTGAACAAGATATCGACGAGTGTTCAACAGGAAAACATAACTGCAGCCATGTCGCCGTGTGCAACAACACCAATGGTTCATATAAATGCACTTGTACGGCAGGATATGTCGGAGACGGACGAAACTGCTCGAGTTCAGGTTGTCCTAAAGACTGGGCGGTACATGACAAGTATTGTTACAAGCTGACGAATGATCGATCCCAAACACTGGAAGATGCTAGAAGAAAATGCCAGGAAATGTCAGCAGATCTCCCAATAATCAAATCGGAGCAGGAAAACACCTTTATTGGTAGCCTGATGAGCAAAAACAAACCTTGGGTTAGGCTTGGTATGAGACGAAACAATAGCCAGTTGCTTTGGTTTGACGGTATATCAGCAGAGAAGTCGAATAGCAAACGTTACAACGCATGGAATCTTGCACTAAAGAGCCGACTGGCGAGAATTGTGCTTACCTGTTCCTTGCGAGCTTTAATGTTTCAAAGTGGAATGACAACAAATGCAATTACGAACCCGGGGAGGCACCTTTTGTCCTTTGTCAAAAATCGCGTTTAAAAGATGGACGACTAAtttaacttacatgtacattattgcCTAACTGAGATAAATTAATCTCTTTTTATCGTCCAGAGTTATGTATCTAGCGTATTATGCATAAATCATCATATAAAGCGAATATAAAGAAGCATAACATAAAGAACAGTTAGAGCAATTGCGCTAACCTTCGCATGAATTATAATTGGAATGAGGAGAAGTGTCAATACAAACTTGAAGAAGCTCCTAACGTCTTTCTTAAAAGGCTCGTTTATAAGATGGACGATTAATTTGACGTGCGTAATTGCCTAGTTAAGATAAATGAATCGCTTTTTATCATCCTAAGTAATGTATTATACATAAATCATGACATAAAGTAGAATCCTTTCGACATTATATTACTGACAGTTTGGAAAAGCGAGTTTTCAAACATGAATTTGTCA

Protein

Uniprot

Uniprot term	Description
Q8SQA4	Adhesion G protein-coupled receptor E5 OS=Bos taurus OX=9913 GN=ADGRE5 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051830	Family	Neurogenic locus notch homolog	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24033	EGF-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan