Gene detail

Detailed information of XP_068709554.1 in Montipora foliosa

Genomic Location: chr6:16720597...16725311
NR annotation: XP_020624770.1, uncharacterized protein LOC110062233 isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068853453.1

TCACAAGCAGGGTCCCCTGTGGTATTTACATTTCTCTTTTAGTAACTTTTTATAGGGCTGCTACTTTTGGATGGGCTTTTACTTTGTTCAGGCAAAGAAAGCATGTAAAGTAAAGTACCTGCTGTTGTTTGAACTtatttttggtttaaattttttcaaactggtttgatttttatctccctttgtttcagattatgatatcAAAAATGTGACAATGATAAAACCGTTTTGTAAAATTTTCAACCAAGGATGAAACTAAACCACAACATAACTTTATGTGACCTAATTAATACAACTGGCCTATGGTGTACCACTCCCTCAGGTCTAACATTTGGGCAGGGAGTGTGGGCTGGTAGTTTAcgtccttttgttcttacagtAATTACATAACTGTTTTAGTTGCAATGAAgtgtaatatatttatttaacatTAAAAAGGTACAGGAAACTGTCACTTTTAAAGCAGATCAGGTGTATTAATTATCTTGGCCTTCTGGTGGTTTTCTATTCCTCTTGCAGATGATAAGGAAAGTCTactcaaacaaaaaaacagtcTTTCCAATTctaaaaagagagaaaagagaACAGGtacagcaaaaaagaaaaaattgcccCAGGAAGACCAAAGTTCAGCTTGCAATCAAACTaagaagaagaaacaaaaaaagaagggTTGTAGCAACAATGATACTGAGGGTGAGGATGTGGAGAatgaagaaaaggaaaggaagcgGAATGAagataaagaaaaaagagagagaaacagaaaagaaaaggaaaaaagacaaaacattttAACAGCACGGGTTGACAACCTCGTTGCAAGGATGAATGACAACATGGATGACAGGTTTGGCAGTGAATTAATTAGCCATTGTTGCGAAATTCTCTCTTCAAACTGTTCTAGAGAGAGCGAAGATGAAGCAGATCACCTACTGATGCAACACTCAGAGGGTAGAAAAGATTCAGGAACTCCCTTGTCAGTAACACAACGACCAATTCCCTTCATTGTCGTCAACTGGCCATAGACAATTACCATCCCTGGACAGAAATGTAGAAGCAGATTTAGCAGAGTTAATTCAACACCAAGATGCCAGGAAAGCTCCAAGCACTCCATTTGTGTCAGGAAGATCACAAAAAAGTCCTTCACAGTCAACCATGGAATCACAAAGATCCATGCAAAAACAGTTTGGAGGAAAGCAGTTCACCTCAATATTGGGGCAGCCAAGGGCCACAGCCCTCAGGCCAACTACTGGGATGAAACGACCCAGGCAGTATCCGCTACAACAACGTATCAGTGATACTGAAGATGATGAAGATATAGAGTCAGAGTACTGTTCTAACTGCAAGAAgctcaaaaaggaaaatgaagagTTGAAAAGAAACTTAGAGGAAATTTTACAAGATAAAGTTTCTGAGCCACCAAGACCTGGCAAGATGGTCGAGCTCACTCCAGGATCTCGAGTATATGTGTATTGCAACATTTTGGAGCAAGCCTCACGGCGATCATCAGGCTCTGGATGTGCTGCTTTTCTGCTAAATTCCTTTTACACAAATAGGGAATTAGTAGGAAAAAACCTAACTGGGGCAAATGGTAAACAATCCACTGATCAGGATATCCTCAACAGCATTGTTGGTAAGTAGAAACActattaatgataatgatgatggtggtggttatgatgctgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatcaatgTCTTAATGGGAGGAAATAAACACCCTTAAGAGAAACAATCAATTAGTTAGAAGCATGTAACTAAGCATGTAACTCGACCCACTGAACTTAAAACCCAGCTTAATCAAATTCAGTTGCAAAACACAAGTTCTGTGTTTAATAACAGGCAAAGTAGGTAGGTTAAGTTCCTTGTAGGTGATATTTTGATCACTGACTAAGAAAACACTTAGAGTGTATTTGGTCATGTCCATAACATTTGAAGAACTCCATAATTCTGAGCAGATCGTTATCCTGTCTTATTTATTTTAAGGATTTACCTTGAAGAAGTACCAAGGAAGCTCAGAGTCTGGAATAAAAATCAGCTTGCGGAATAAGCTGTCAGCACTGAATTCACGTACAAGCAGTACAAGCACTATAGTTTCCACATTGTAAtctatttcttgttttttatggCTTTCTATTACTATTTACAGTTTACAATACAACAGTCACTTCATCTTCTTTGGCTGATCTCCACAATCATGGGAATCCAGGAGAGTGATTGATTTAAGCAGCTAGTCAGTGGTTGCAAATATCACTTTCACATCCGTTGGTTTGATATACAATAGTACAATAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01525	Rota_NS26	Rotavirus NS26	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002512	Family	Rotavirus A/C, non-structural protein 5	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0019079	Biological Process	viral genome replication	Interproscan
GO:0030430	Cellular Component	host cell cytoplasm	Interproscan