Gene detail

Detailed information of XP_068710193.1 in Montipora foliosa

Genomic Location: chr6:37899500...37913165
NR annotation: XP_015769931.1, PREDICTED: serine protease HTRA2, mitochondrial-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068854092.1

AGTAAGTCATGATATTGGAGCACGTATTCTAACAGTCAAAAATGGAACGGCGAATTTCGGTCGGAATATTCCAACCGAAATAAGtggaccacctccagaggtgatcccgaatattccggtcggaagaaaccgaaacggacctttccatttgatttccgacCGAAATCTTTGGCATAATGGCAAGCACCCCTGGGTTCAAAAGCTCAGCAATCACAGAGAGAGACTAAGTCCTAATCGTTCCCAGATCTCTTAACCCCTCAtccgtcaaaatggcggcaacttCATGGAGAAGGTGGCAAAAATTTGGCCAAATAGAGTGGCTGTCAGGAAGAACGAAAACTAAAAGCATCATTCAGATTTATAGAGTATTAAGTACAGAAACCAAACAATCTACCAACAAATTTCCCTGGCCTTGGATTGGCTCTATTGTGTTAGGTGGTTTTCTTGGTTTTGGAATACCAAAACTGTTCAAACACTGCAAATTGAGCGCAAGCGTAGAGGCCAAAGCCGTTCCTAACGAAGGAAATGTATACAATTCTGATTCACCTCCTCGATCAGCCAGATTTAATTTCATTGCTGATGCTGTGGAAAAAGCTGCACCCGCCGTCGTGAACATTGAAGTAACGGGACGACCCGCGGGATTCGTGTTTGGGTCTCACTCCGGTCCCACAAGCGCTGGTTCTGGATTTATTGTTACTGAAGATGGAATGGTTCTTACTAATGCACATGTAGTGGAAAATGCAATGAACGTTAGTGTTAAGTTGAAAGATGGAAGACATTTCAGCGGCACAGTGATTGATATTGATTTAGAAAATGACTTGGCTGCTGTTAAACTTGATTCCAGCAATAAGaacaTTAAGTTTCCTACTTTAACTCTTGGTTCATCCTCTTCAATTCGACCTGGAGAGTGGGTTGTGGCAATGGGTAGTCCTCTGCAGCTTAGTAACACAATAACAGCAGGAATTGTCAGTACTGTACATCGAGCAGGAGTGGAGATTGGATTGCCAAACAGGGAGTTGGAATACATCCAGACAGATGCTGCTATTAATATTGGAAACTCTGGAGGACCTCTTGTCAACTTGGACGGCCATGTTATTGGTATAAATGCAATAACCATGCGATTTGCAGCTGgaatttccttttccattccaaTCGATTCTGCCAAAGGCTTCCTTTCAAAATCAATAGAAAAAGCCAGGAGTGGAGACTACAGAAGCAGAAATACAAAAAGGCGGCTGGCACCATATCAGCGCTGGTACATTGGGATTACCATGTTGACACTTACACCACAGATCCTTGATGAACTGAGACGGAGAGACCAAAGATTTCATGAAGTTACACATGGGGTGCTTGTTGCACAAATAAATTATGGATCCCCAGCACATAGAGCTGGCCTACGATCAGGTGACGTTATCACCAAAATAAATAGCCATGCAACAGAATCATCCATGCAAGTTCACCAGCATGTGCGTAAGGGAGGAACACTCCAAATGGAGGTTACCAGAGGTGAACAAACTCTGCATTTTACAGTCCATCCTGAAGTTGTGGGATAGCTGCATCAAAACATTTTTATCAGTGTTTAGCACCAATAAAAAATGGTGAACTTACAATAATGAGGTTGACAAGGTTTATCTTTTTCTAAGCTTTGATCATAAAttatttggaaaaaataagTTGTGACAGAGGGTAATGTTGTTGAAATTTGGGGCGACCGcagtcgaaggcaacccgaaggctcctttttcaatGCTTCTACCATGACTTGCGGCATCTACCGCAACTCATGGCaggggtctgttcagtaatagatcacaagagacgtcaaaatgtggtaagaacatcagtgacacgtGAGatacttttttgttcttaccacattttgacatcatctgtgatctattactgaacataTGCGCAGAAACATGGAATCTATTACTTTGTTAAAATTTAATAGATCACCTCTTTGGTTTATTACTAATCAGATACATGTACGTGTAAGTTGCAAATGGACTCTATTTGTTGGACATGAAAATGTGCCACAAAAGGTGTGGCATGTTAGGCTTCTAATAGCCATTTTTCATTCATCCATTGGTGCAATAAAAAGCCCTTATCTGTCCTTACTATGGTATCAGTCACCTTTTATTGACAGGGAAATATAAGAGTCACCTTACTATTTTTTATAAATTAAACTGTTACTGGCCAGAACTATAAAAGAACATCAGGGGTTCATACAGTATGTTTAAAAAATCACATCACACACTGTATGCACTGGAGTCAGACATAATATACGGTACACATATTTCCTTTTTCTGGGCCAAATTTTAGAAAATCTTGCAACAAGAACATAATATGCCTCCCAGTACCTCAAAAGACACACATGAAGTCCGAATTGAGGCCTTTGCTCAGAAAAAGGGTTTTGAGTAATTTGTTCAACGCTTGTTGTAAACTATAGCTTCAAAGAATAAATACCCACTCAATAGTTTCTGTCAGGattttttattacaaatttcATTACCCATCCATACCAATGCATCTTTCTCATCTACCTGAAAACAATATAATGCTTGGAAACTTTCAATAAAATGAGGAACCTATCATTGTGTCTGTGAATGGAGTCTACCACTATCCGTCTACACAGGAAACCCTAAAGTCTTTTGTTCTCCCTTCTTGAAGCCCATTCTCAAGGAAAGGGTTGCAAATGAGGTGTGCTTGTTTATTGTAAACAGTAGCTCCCCACAAAACTTTTTTGTAAAAAGTATCTATGTTAAGACACATTGAGACCAATGTATTTTCCGAAGTGCCTGTCTTCATATAATGCAAAATGCTTGGAAACTCTGTAAAAAGCTGTAACCTAGGGTTGTTTCTGTTTTCATCAGTCAAATTACTAAGCATGATGTAGCAACTTGATACATTACTGATTATGTAATGTATCAAGACCTTATCAAAGAAAATGTAGTTGTGTGGATGTGTCATTAGCCATCAGTAATTTGATATGACATGGCTAAACATTCATCATTTATCCAtaagataatattaaattatggctgttgtgtatttatttgttttaactTTGAAATGCCAATAAAAGCAGTTTGAATCTTGTGTTATGGCAAAAGAA

Protein

Uniprot

Uniprot term	Description
A0JNK3	Serine protease HTRA2, mitochondrial OS=Bos taurus OX=9913 GN=HTRA2 PE=2 SV=1
B4QZU6	Serine protease HTRA2, mitochondrial OS=Drosophila simulans OX=7240 GN=HtrA2 PE=3 SV=1
B4HEM8	Serine protease HTRA2, mitochondrial OS=Drosophila sechellia OX=7238 GN=HtrA2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13365	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan
PF13180	PDZ_2	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR001940	Family	Peptidase S1C	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22939	SERINE PROTEASE FAMILY S1C HTRA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0012501	Biological Process	programmed cell death	Interproscan
GO:0043065	Biological Process	positive regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08669	HTRA2, PRSS25; HtrA serine peptidase 2	EC:3.4.21.108	Chaperones and folding catalysts	ko03110	deepkoala