Genomic Location: chr7:31732419...31734668
NR annotation: CAH3128276.1, unnamed protein product [Porites lobata]
| CDS | ||||
| LOC138010106 | ||||
| Transcript |
| rna-XM_068857061.1 |
| Protein |
| XP_068713162.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q5D7I5 | Tripartite motif-containing protein 5 OS=Cebuella pygmaea OX=9493 GN=TRIM5 PE=3 SV=1 | |||
| Q5D7I2 | Tripartite motif-containing protein 5 OS=Pithecia pithecia OX=43777 GN=TRIM5 PE=3 SV=1 | |||
| Q5D7H8 | Tripartite motif-containing protein 5 OS=Plecturocebus donacophilus OX=230833 GN=TRIM5 PE=3 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15227 | zf-C3HC4_4 | zinc finger of C3HC4-type, RING | Domain | Interproscan |
| PF00630 | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF01436 | NHL | NHL repeat | Repeat | Interproscan |
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR001258 | Repeat | NHL repeat | Interproscan |
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR017868 | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR050952 | Family | Tripartite Motif and NHL Repeat Containing E3 Ligases | Interproscan |
| IPR001298 | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24104 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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