Gene detail

Detailed information of XP_068713841.1 in Montipora foliosa

Genomic Location: chr7:14790245...14800764
NR annotation: PFX18681.1, Ankyrin repeat domain-containing protein 16 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068857740.1

AGTTCATTTCTCTTGTTATGAGAATTTCCCCGATTATCCTCCGCCTTTACGCCTCGTACAGCGAAACAAACTTGACGAATTCATCGCTATGGTGGATAACAGCCAAGATAAAAGAGCCATATTGAACTGTGTCCATTCCAAATCTGGTGACACAGCTTTAATTGTGGCAGCACGACAAGGGCACTTTGATTTGATCAAGTTTTTGATTGAAAGTGGAGTTGACATCGAGCAACGTAACAAGGACTTGAAACGAGCTTTACACGAAGCAGCTGCTGGATCGCATGTGAAATGTGTAAAAGTTCTCATTTCTTATAAAGCGGAGATTGATTGTTTGAAAAGAGCAGATTGGACTCCACTTATGATGTCATGTACCAAGCCTAACATCGACACCATCTCTTTATTGGTCCAGAGTGGAGCAAACATGAAACTAAAAAACAAGGATGGATGGAATTGTTTCCATGTTGCTGCTAGAGAAGGTCATAGAGACATCTTATGTTACCTCCTTAATTGCTGTGCAGGCATCTGGGACACTTGTAGTAAGAATGGACGCACACCTCTCCATACAGCAGccCTTCATGGGAAAACAGAAGCTGTAAGGCTCATGAtttccagATGTGGTTACATTCCGGACTCGCCTGACAGCTGTGGGTTAACACCTCTTATGGATGCCCTGCGTGCTGGCTTTATACAAGTTGCAGAGATTCTTGTTACTGAGCATAAGGCTTGTGTGAGAAAGAAAGATAAACTTGGCAGACAAGCCATGCATCTTGCAGCTAGGGCTGGGTGTAATGTCTCGTTAGATTATCTGATAACAAACTTTGATGCAGACGTAAACATGTGCACAGAAAACTCCGATCTCACCCCATTGCACCTAGCAGCGAAGGAAGGTTTTAATGAAACGGTTCAATTTTTGCTGGACAGAGGCGCAAGGATAAACTCCCAAGACAAAAATGGAAGAACAGCTCTTCATCTTTCTTCAGCCGCGGGACATGAAGGTACGGTGGATATTCTGTTACGCTTGTACAAAGCCGATAACAACATCAAAGACTGTTTTGGGAAGAAGGCTGAAGACTATGCTCTGAAACCTGCGGTGCGCCAAAACTTTGGCTTGGAACCTGCATAGTGTAAGCTGCTTCTCTATCGTAGTTTCAGAAGAGAAATTAAGTGGAAGAGTAGAAAATCAGCGTAATGTCTTTTTAAGTAAAGAGATGGCGGCGGACAATACATGTAACTTCAAACTTTCCTTTTCGTGTCACCGGAAGTTGATATCCTGAAAACCCATTTTTCGGCATGCTTTTTGCGCAATCTCACGCTCGCACGTACGCAAGCACGATTCCGTTTCAAATGTGCTGAAAGATACACAGCACGTGAGCTGCAAAAAAGAACTCAATTTCCAAAACAGGATTTTCTCTTATGAAAGAGAAGTTTAAACAACGAAGATGGCTATGGCAACTCTAGAGAAAGAATGTattaatattattcatcaaaagTGCACTTGCAGCGAGGGTTTTAGCAACACTCTTCAAaatacaaaagtaaatttcGAAACTGTTTGTGTCAACACAACTTCATAGAATAAATCATGACTTCGGTCAAACTGCACAACCTGCAGGAGAAGgaaaatcgcgaaatactttCGATATCCCAAATATTTCGAAGTGGCTGAAAACTTTCCAAGATGACGGTAACTCAAGCCCGCCATTGTTTAGAACTATGAATCGTTATGCAACTTAGTCAAATTAGGCAATTCCGACTTTTTGACAGCCCAATCCAAAAATCGTGAGCGCCAGTCTTTTATTTCCTTTACGAAACTGGCAAAATGTTTGTGGTTAAACTACACGATTGAAGACATGGCGCCAGTACGCCAAGGAGCGGAGTCAGTATAGGGTGTTTTTACGTGACGTCACGACAGCTATGTTGGTGTACctaagaccttagacagcaatgaccagaaccaaggtggctgaccagcggttttcgttaaaacaatggatggctgggggtgctcagtctcgcgggctcagaaaacctggttgtggtcatggttaagttatttaaggtttttcaccTAAACAacggaacggcggccatgttgatgtgcCCAACTAATTCTCCGGGAATTGTGCTCTTTTATCatacaaacattttcttttgtttcggtggaaaaacaaggttactgatcacgtgggTGCAAACACTCTATTCTTCCGGGTGCAGCATGTACTTGGGCTTTTAAAAACGGAATAAATAATGCCGGTAGCGGAAAATACGAGAGCGACAATAAACGTGCCAAAATGTGGAATGCCCTCCTTATTAGACctgttgtttgtttatttatttatttatttgaggtGCTACCGTTCTCGTTGACGCCGTCTAGCCTCAAGGTCCCGCTGGTTTGGTCGAAAACGGCACAAAAAATGTACCAAAC

Protein

Uniprot

Uniprot term	Description
A2AS55	Ankyrin repeat domain-containing protein 16 OS=Mus musculus OX=10090 GN=Ankrd16 PE=1 SV=1
Q499M5	Ankyrin repeat domain-containing protein 16 OS=Rattus norvegicus OX=10116 GN=Ankrd16 PE=2 SV=1
Q6P6B7	Ankyrin repeat domain-containing protein 16 OS=Homo sapiens OX=9606 GN=ANKRD16 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan