Gene detail

Detailed information of XP_068715653.1 in Montipora foliosa

Genomic Location: chr8:51701768...51738480
NR annotation: CAH3193692.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068859552.1

TTATTCGGTCTCGTCGAAGATCCATGCTTATAAGGAATCTGTTAGTTTGCCGTTGGTTTTCAATCGGAAATAGACCATGCCGGCGGGAGTTTCAACCTCAGAAGTCAAATTTTTACTACTGTAACAAGAAACAAGAGGATGAATGTGAAAGTTTTATCTCGAAGGAAAACGGGACGGAGACCCCGCTATCTACAGGCACTGAGGGATTTTACAGCAGCTGATGCTTGCTTTTCTGATGGGGCAAATCCTCTTTCCTTTCACATAGGTGAAATCTTCACATTTTTGAGTCGCAGAGACAGTTACTGGGTTAATGTCGAGCGGACGATCTGGAAACACAACCGTCTCCTCAAGTCAAAAGATTACCCAGCAGTTGAGCGGGGAATCGTACCTCTGGACTACGTAATCGAAATGGATATGAATACCGAACAGAGTGGAAGAACTACTTCGGAGAAATCTGTAGATGATCTAGCTTCTGACGTCGAAAGTCATGACTCCTTTAAGCTTAAGAATGAAAGAGATGCACTTGCAGAGGAATTGAAACAAGTAAAGAGAAAGCTTGATGATGCATATAGAGAGAATACTGTCCTTCATGATAGGTCAGTTCAAGAGTACAAGCAAAATTTACAGCTTGTTCATCAGCTGTTATCACAGTATTATGCAGTTGGAGAAGCTGTGGTCACTGCCAAAGAAGAATTGGCAATTGCACAAAAATTATTAATAGAgGAGCAACAAAAAAGTCAACTTTATCTAAAGAAGGTGGAAGACATTAAGactcaaataaataaatcagGCAATAAAGCTGCGATTAAACTTTTAGATAAGATACTTCAAAAAGACACAAAAACACAACCAAATGGTTTGATACAAAAGggtAAATCTGATAATTCTGGTGATGATTTAATGCTATCATGTGCTCTGTGTCATGAAAAAATGAGGGTTTCCGACCTTGCCTCACATTCCAAAGTTTGCTGCCCAAAGGAAACAAGCAAACACCCAACCACTCCAACAACTCCAAGCCCAGAACTTCTCCGTGTTACTGTAACATGTTCTGAAACTGATGAGAAAAATGCAACATTTAAAGTTGTTACAAAGACTACTCTTGAACACTACAAATTCTCTGACTATGAGGTTCATCGAAGTGAGGGTGACTTTGTTTGGCTCCAATCAGCATTAGAGGAGTCTTGTCCTGAAAGAATAATACCGCCATTGGTTCCGCATTCTTCGTTGCATGGGAAAATGAGAGAAGTTCAGAGATTTTTGTCAAGGATTTCTGCTCACAAAGTTTTGAAAAAGCACTATCTCCTATACTTGTTTTTAACTGGTGAGGGGCAGGATGTGCAAAAAGCACGAGATGAACTTGAGAGGAAAAAGCAGAAAGACAAAGTCACAGAGCAGGAATGTTTAAGTCAAGATTGTTGTGATCAGAATGCCCCAGTTATCAAGTGTATGAGATACTTAAAgcagtttgcagaaaatcttgATGGCTTGATTATTCATCTTCAGGAAAGTTTGAACAAGAACACTATAGATGGTTCTGGTGTTTGGTTCAAATCTTTGGCAGACTTCGAACCAGCTGATACATATTTAAAGACAGCAGCAGAAGCCCTCAGCAAAATTTGTATGGAGTTAGAAAATAACCGAGAAACATCAGAAGAGAAACTTATTGTGAATGATCTGAGGAGTGTTTACCACTATGTTGAAAGTGCAAAGGGTCTTCTCGGCAGAGTGCAGACAGCAGTAGCTAGGTTTTTGCACTGGGAAGAGGAAGTCAGAGCTTATGAGCAAATGAAGAAACCCAATGAGGAAAACGAATCAGATACAGGTCATCAAACACAAAAGTGGGCAGAGGCAAATTCCAACTGTGCTGATGCCAAGAAAAACTTAGAAGATCTGTGTAAAGAGTTGTCATCAGAGCTGGCACATTTTGACTGGAGAAAAGAAGTGGAGTTGAGGGAAATATTGATTGAATACTCTGCACTTAAATCAGAGCATTTTGAAAAGGTTCAAAGTAAATGGTTTGGAGTGAAGCTAATGGTTGAGGCACCAGTAGATGCAGAGGTGCGAGCTATCAAATGTTTGGAGGATACATGATCACCCATGTCAACTTTGTTAACTGCTATCCACATTTTACAAGACATAAAATATATCATTTCTATTGTGATTAATGCTAATTTTAGGGTAATGACATAACTTAGAGTTAAGACTtaagttttaaataaaaaacaTTGTCTATTAAGGCAAAATTTATGTCATCATATAAAGCCAGCCAGTGTGCAACTAACAGATGACAGTAAAAGCCAAAAATACTATTACAAtagtaaaaaaattatataaaaacCTTGATAATAGAAATCAATACAAAGATCAGGATAAGTCAGATTGGATTGATAGACGAATGTTAATGATGAAAATAAAGCAGGCTAATTTGGTGcacataaataataatatattagaGAATGAAATTTATACATATTGTGAGCCTGCAGAGCTGTGTCATTGTTTGCATCTCTCTTTTGTTATTTTGACAAGTGAGCCAGGAAATGCACAGCTTAAATCATAAATTCATTGTATAATAATTGGTAAGAAATACACCATTTTGTACTTCTAGAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR001452	Domain	SH3 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10555	SORTING NEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005768	Cellular Component	endosome	Interproscan
GO:0010008	Cellular Component	endosome membrane	Interproscan
GO:0034498	Biological Process	early endosome to Golgi transport	Interproscan