Gene detail

Detailed information of XP_068716026.1 in Montipora foliosa

Genomic Location: chr8:31504873...31515383
NR annotation: XP_044179136.1, TNF receptor-associated factor 5-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_068859925.1

tggcggccgaagaTACCTTATTTGCGGCTAAATACAGGAATTGCACCGACCTTAGTTCCAGTCATTCACTTGTACAGATATTACAAATTTGAACCTGTGAGAATGACAGCCCCAACACCAAACCAATGTTTTTACCCAGACTGCTGGTCGGTGCAATTCCTGCAAGTGCAAGTGCAAGCTGCAAGTGATACCTTGGGCGATTACTTGCTCCACGAATTTTTTATAGCAACAGCATCCTGTACACCTTTTTTCTTTCGGAACAGCTGTATTTCAGTGGTAAAACTTCTTTATAGTCTTCACTCTCGCGTGATCGAAGTTTCGTCGGTGTCTTCATGCACAATTGAGTTGGGCAGATTTCCGAGTTAAATGTTGTCATACATGTTGATCGATTGAGGTGGGAATTCAGCCGAGGCCGCGCTGTCAGTTGAAGTCTGCTAAGAAAAAAACTTCTTCACCAGTTCCTAAATTTTTCAACCCATTGATTAAACCAGTGTGTCTTGGATGCGGTCATTCGCGATGCAAGGCCTGTATCCAAGAATTGATTTCCAATGCAAGAAGTCGCCGATGTCCTGCATGCCGCGAGGCTGTTGATGCCAGTCAAATAAGGGATAACGTGGCCTTAGGTCAAATGATTAGCGAGTTTCCCGTGCATTGTTTAAGTCCAGGTTGTGGCTGGAAAGGAACTTATGGCAATGCTGCGAACCATCATTCTAGCTGCCCAAAACTTCGTCTACAGTGTCAAAATGAAGAGTGCCAGCACGTGTGTCAGCGAGAAGATTTGCCAATGCATGCTGCATCATGCGTTAAGAGAAAAGTGCCATGCCCAGAATGTGGCATGCCGATAAAAAACGAGGTAACGGACGAACACAGGGAGAAAGGATGTCCGCATTCAGTTGAACCTTGCCCACTTAGTTGTGGTGAACTACTATCGAGaagccAGATTAATCTTCATTTGCATAATTGCCCAGAGAGAGCCGTGGAATGCCAGGTGCCGGGCTGCAAGCGGGTTATTAAGCGCAAAAATACAGCTGCCCATGTGGTTGAATCAGCTGTGTCTCATTTTCGACTTCAGTCTGGAGAGATACAGCGTTTGCGCCGCGAAATCCATGAAAAGAGCAACCCACAAAATCAATATGGCCCGAAGGAAAAACATTCGGCATCATTTCGATGGACTATAGAGAAGTTTTTGGAGTTTCATGCCCTTCACAGGACCAAGCAAGAACCCTTAACGAGCCAAGCCTTTATTAAAACTGGCCACAGATGGAGGGGTGTCATCGACAACAACAGTGTCTTCTTACAACTGCGCGCAGCTGCTAATCCTGTAACAGCACATATAAGGTTTGTTTTGATGCCTGGCGAGCACACCAAGGACAAGATTGTGGATGTTGGACGCGTCACTCTCAAAGAAGGGGACATGTGGGGTGCGCGTGTGCCAGATATGAAGAGATTCATTGATGGAAATGGAAATCTGGCCGTTAAATTTATAATAACATATCTGGAATATTAATTTATGCTATATTCGTTTAATTAATTAGGACTCCATGTAGAATACGCAATTTCATTGCTCCATTTAGTGCATGAACTAGAAGACATCGATTCTTTTTACACATTCAACACactaaaactgtaaaaattgtaaaaatataacctactactcttgaaacatcTTTCGCTCTTAGAACCTCTTCAGTCAGTATGCTTACACATATTTCAAGACTTCTTAGTGAGTTGAATGTGTAAAAGGACCTCGACGTTCAAAGTTATTTAGCCATTTATTGAAACCATTTGTTGACGATAACACTCAACAACATCCACGGAAACCACAAGCGACATTTCCTAATGTTACAATAAATTTTTGAAAGGTCGTGAAAAACGAGACAACTTAGGTAAACCCTAACATCACTCGTTCCCTTGGCGACGAAGCCTTTCGAGGAATCGACACTTGGGACACTAACATCACTCGTTCCCTTGGCGACGAAGCCTTTCGAGGAATCGACACTTGGGACACTAACATCACTCGTTCCCTTGGCGACGAAGCCTTTCGAGGAATCGACACTTGGGACACTAACATCACTAGTTCCCTTGGCGACGAAGCCTTTCGAGGAATCGACACTTGGGAAACTAACATCAACATTTCCCTTGGGGATGAAGCCTTTCCAGGAATCGACatttgggacactaacatcaCTCGTTCCCTTGGCGACGATGCCCTTTGGGGCATTGACACTTGGGAGAGTTCCTGAAGTAACAAGTCCTTTGAGGGTATCAACACTTGGATCTAAAATAATAGTAGTCTGTTTTGATAATAATTGGGATGAGGGTCTCTTGGGCTTGGGCTTGGACACTTAAGGTACACACCAGTTTCCTTTGGCGACAAGGCCTGGTGAGTAATCAGCACTTGGGACATGTGAATCACTAGTTTCCTTGGCACCAAGTTCCTTTCGTGGATAGGGTCTCAGAAAAAAACCTACATTGCTACTTCCATTGGCCACAAGGTCATTCTGGCCATCAAGACTTATTTTATTACTCCTAACAATATCCAAAAATGAACATTTTAACACCcacttttcaactaaaaatacATACCGTAATTTCATTTGGGGTAGGATACTTCCCTTACGTTTTTTCATTGCAGGTTTCATTCAGAGGAAATTTTGAAGGGTCAAAAGAATTACATGCTACAATGACTGATGATCCCACTAGGAACAGCACATCTGGCAGGAATCAGGAGAGAGAAGGAGAGAAAGAGCTGAAAAAGAGAAAGGACAAGAGAGCAACAGCAGAAAGAAAGagggccaaaaaagagaaagcagCGAAAAATAGTTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09848	TRAF4; TNF receptor-associated factor 4	-	Small cell lung cancer	ko05222	deepkoala