Gene detail

Detailed information of XP_068720238.1 in Montipora capricornis

Genomic Location: chr9:42208137...42247631
NR annotation: XP_029206011.2, uncharacterized protein LOC114969842 isoform X2 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138016951

ATGTCCCAATTTAAGGTTGAAAAAGTCACTAAAGTAAAAGGACTAACAGATCTTTCGGCCAAAGCCAGAATTGGTGAGAAAACCGAAACTACAGCTAAGCGTAAAGGAAATTCTGCGCCAAGCACAGAACGCCCAGCTTCAAATGGACGACAAACGTCGGTGAAGAAATCTGCTGCATCAGCAAAGGGAACATCCAGTGATTTAACCAAATCTACTGCACGAACACCTGTTTCACATCATCATGTAACAAACCCACCAAAGCCTGCAGCGAGAAGTAAACAAGGCTTATCAGCGGCAGCAACAACATCATCAAAGGCAAAGAATTGTCCAGCTTCGCAGCAAAGTAGGACAGCACCAAATTCTTCAACAGGTGTAGCTGCCGTCAAGAAAAAGTCACCTGGCCAAGGAGTTGCTGCACCACCTGTTCCTCATTCAAGGACAACAGCACTTCCACAAAAGACAGTTAAAGAAGATCAGAAAAAAAGGAAAACTGAACTTAAAAAGGAGAGCAGTTATGATGCCAGTGACAGTGATTCTGAGAAGGGGAGTAGAGATAGATTAAACACTGATGGGGATTTTGGGTATGAAACTGGATCGCTTGATGACAGCGATGTATCAACTGGCGAACTTCTTAGTCCGTCAGCTAAAGATGAGCAGAAAACTATTTTAATGCCTAGTCAAAGTGATAATAGTAGTTGTACTTATGCCGACCTTGACTTGAAGAAATTACCTGCTGTTGATGAAGGGAGTAAAGAAATACAGTGTCCAGAAACACATGAGATAGTATACTCTGAACTTTCATTAAATGACCAAGGTGCTGATGACAGTGGATTATACACCTATGCAGGGGATGGGTTTAGGCCTTTGATTGTGCAAGAAGGTGTTGGTATTGCAGCCCCTATTGCGATCCCTATTGCAGCACAGAAGCTAAATAAAAATCCAATTATCGAAAATGACAGTGAAAAGGTAAAGCTTTGCGATAGTGGAAGACAGACGCCTCCAGAGTATGAAGAAGTTAAAATTGTTGATCGCAACTTTGACAGATCAAATATCAAAGAAGTGCCATCAAACCAAAGGACGGTGGAGACAGAAAATGACCCTATACATATTGTTGGACCCAAGAACGATCTTTATGCAGTTGTACACAAAAAGCCAAAGGGTGCAGAATGTAGTGACAGTACTACACAGCTCCCTAGACAGAGCAGTCCGATACAAAGGCCTATTGTTGAATTAGGTGATGTTGTGCCTGCAATTCCGGGTGGGCGGAAGGACTCAAACATGTATCAAGCTATCACAGGAGAGCTTCAGAGCATGATCATGGCATGTGATAATGTAGAGTTTGAAGATTTATCATCTAGGAAGAATTCAGTTGAAAAAAAGACAAGTTCAGGGGATAAAAGAGGGCCTCCACCAAAGCCAAAGCCTTATGCAGGACCAGGTGTTAAAAAGTCTGATCCAGATAAAGCACAAACAGGGCAAGCTAAAGAAAACCAAATGAAGGACACAGAGCCTCAGGAAGGTCGGCCATTGTATGCCACAGTTCAAAAACTACCAAAACCTGAAAAGAATGACTCGGTAGAGTCCCTTGATCAACTGAGAATTCCTGCATCATCTGATGATGATAATAATGACAATACCAGTGATGGAGAGTTGCCGCCACCTCTTCCGTCAAGGTTACCAAATCTGGAGGATACCTTAGAAACAACTGAACAATGTGAGAACTCCTTTCATTTTGATAAAGGAGATAAAGTGGAGGAGAAACCTAAAAAGAGTGGGGGCTTTAAACTGTTTAAAAGAAAACACAGAAGGCAGATGTCAGATGGAAATGTGGATTTGGAAGCCAGTCCTGCAGGCAGTCCAGTGTTTCAGCATCGTCGATCAAAATCACAGGCAGACGTTATGAACATTGGGGAGAATGGACAAAGTCATATAGACCAATCAGATCCCAAAGCAATGTATTCAGAAATTGATATTCAGCCTGGAAAAATAGAGGTTTCTTCGGACAAGAAGCCACCTGTCAAGCCTTACATGGAAGTTGACATAACACAACCTCCTGTCACCCCTACTGAGTTTAAGGAGGCGAAATTTATGGGAGAGGAGATTGAGGATTACAGTGAACCATATGAATTGCCTGAGGGATGGAGGGAGGTGAATGGTGATAATGGCACTTACTATTGGCATGTTGCTTCTGGCACAACTCAGTGGACCTTACCCCAGGTGGCACCAAGACCAAAGAAAAAAGCAACTGAAGAGGCAAAATCTGCAGAAGCAACAGAAAGGCAAAAGGTGCTTAGTTTTCCTGTGCACTCTATGGGTTGGATTGAGCTGGAGGAAAACCAAGTTGCACCGCATAACATGAGCGAAACAATCTCTGACTGCATCTCATCATTGGCACAGCAGCGGAAGGACCTCTGGAACACGTCAGACACCTGGGGAGAGGGGAAGGATATAAGGCTATTGTTGGAAGGAGATGTTCTCAAACTTGCAGAACCAAGAACAAAAGCCACTTTGTTAGTTCAGCCTGTTTCTAAAATGAGAGTGTGGGGTATCGGCAAGGAGGATCAAAGGGATTTCGCATATGTAGCTCGGGATCCCTCAACTGGTAAACACAAGTGTCACATGTTTCGCTGCCATGGCAATATATCTGGTCGTACAATCACCAATGCTTTGCATGACATGTGCAGTAAGATTCTGGAAAAGAAGAAAAAGGCGCAGGAAAGCAACAGGAAGATGTCAGCACAGAAGCCGTGGTCCGACATTATTAACACCCCTCCGCCATCATCAGCAAGAGATCATGCCAGTTTCAACGAAAAGCCTCATGTGGAACCTAAGAAGAGCTTTTCTGCCAAGTATGTCGGAAGGATTGATGTGCCCAAACCTACAGGTGTGGAGATTCTGAACAAGGCTATTAACAAGCTTACTAGCAAAGGCGGAGTCTGGAAAACCATCCTGATAGAAATTAGTGTTTCAAACATCAGAATAACAGATTGCACGACACAAGAGTTGATTTCGGAAGACAGGGTCCGGTTCATGTCATTCTTTGGTGTTGGCAAGGATGAAAGACTTTGTGGTTACATAGTGTGCACCTCACCAGATGTGTTTCTGTGTCACGTCTTTCACTGCACTCCGAATGCTGCAGCGCTCACCAAGGCATTAGCTGAAGCTTGTCAGCTGCGTTTTCAGAAATGTGTTGATGCCCATCCAGAATTAATGCAGAAAGTAACTGCCTCTGAACAAGACAAAATAAAAGAAAAATCGGATAAGGATAAGGCTGGATTTATGACCAGTGTCCAAGGGCTCCTGGGAAAGTTCGGACAAAAGATAGGGGGAGGGAAGAAGGAGGAGAATCAGCCTGACACCAAGTCCTCGCAAAGCAATATTCATGTGATAACTTGTAAACCTACACACACATTTATGGTGAAATACTACGGTGCTCTTCCTGTTGCTGTGGGGACTGGAATCGAAACTGTGGAGGAGGCAGCTAAGCATTTGGCAGGTGGAACTCTGCTTGTTTGTCAGTTAGATGTGGCTCTAAATGGTGTAACGCTTTACGACAGTCAGAGAAGCGCTTTGTCGAAGAGAAACTTGGATGCGGATACGATATCATATTGTGGGCTAACAAGTAATAGAAGCCACTTTGGACTCATACAGACTATGGGTGGAGGAAAATATATCTGTCATGTGTTTGCAGAGTACAAGACCAAAGCTGGTCCTATTGTTGCTGCTATTCATGAGACTCTGTGA

Transcript

rna-XM_068864137.1

GTCTGCATTCAAAATACCCATAGTGGGGGTTCGCCTCCCTTACATTTATCAATGATGTGAGATTCTGCTCGCTTTTTGGAATCTATGTGATCCATCGAAAAGGAAGCCAAATATTTAAGGCTGTGGGCTGATTATGTCCCAATTTAAGGTTGAAAAAGTCACTAAAGTAAAAGGACTAACAGATCTTTCGGCCAAAGCCAGAATTGGTGAGAAAACCGAAACTACAGCTAAGCGTAAAGGAAATTCTGCGCCAAGCACAGAACGCCCAGCTTCAAATGGACGACAAACGTCGGTGAAGaaatctGCTGCATCAGCAAAGGGAACATCCAGTGATTTAACCAAATCTACTGCACGAACACCTGTTTCACATCATCATGTAACAAACCCACCAAAGCCTGCAGCGAGAAGTAAACAAGGCTTATCAGCGGCAGCAACAACATCATCAAAGGCAAAGAATTGTCCAGCTTCGCAGCAAAGTAGGACAGCACCAAATTCTTCAACAGGTGTAGCTGCCGTCAAGAAAAAGTCACCTGGCCAAGGAGTTGCTGCACCACCTGTTCCTCATTCAAGGACAACAGCACTTCCACAAAAGACAGTTAAAGAAGatcagaaaaaaaggaaaactgaacTTAAAAAGGAGAGCAGTTATGATGCCAGTGACAGTGATTCTGAGAAGGGGAGTAGAGATAGATTAAACACTGATGGGGATTTTGGGTATGAAACTGGATCGCTTGATGACAGCGATGTATCAACTGGCGAACTTCTTAGTCCGTCAGCTAAAGATGagcagaaaactattttaatgcctAGTCAAAGTGATAATAGTAGTTGTACTTATGCCGACCTTGACTTGAAGAAATTACCTGCTGTTGATGAAGGGAGTAAAGAAATACAGTGTCCAGAAACACATGAGATAGTATACTCTGAACTTTCATTAAATGACCAAGGTGCTGATGACAGTGGATTATACACCTATGCAGGGGATGGGTTTAGGCCTTTGATTGTGCAAGAAGGTGTTGGTATTGCAGCCCCTATTGCGATCCCTATTGCAGCACAGAAGCTAAATAAAAATCCAATTATCGAAAATGACAGTGAAAAGGTAAAGCTTTGCGATAGTGGAAGACAGACGCCTCCAGAGTATGAAGAAGTTAAAATTGTTGATCGCAACTTTGACAGATCAAATATCAAAGAAGTGCCATCAAACCAAAGGACGGTGGAGACAGAAAATGACCCTATACATATTGTTGGACCCAAGAACGATCTTTATGCAGTTGTACACAAAAAGCCAAAGGGTGCAGAATGTAGTGACAGTACTACACAGCTCCCTAGACAGAGCAGTCCGATACAAAGGCCTATTGTTGAATTAGGTGATGTTGTGCCTGCAATTCCGGGTGGGCGGAAGGACTCAAACATGTATCAAGCTATCACAGGAGAGCTTCAGAGCATGATCATGGCATGTGATAATGTAGAGTTTGAAGATTTATCATCTAGGAAGAATTCAGTTGAAAAAAAGACAAGTTCAGGGGATAAAAGAGGGCCTCCACCAAAGCCAAAGCCTTATGCAGGACCAGGTGTTAAAAAGTCTGATCCAGATAAAGCACAAACAGGGCAAGCTAAAGAAAACCAAATGAAGGACACAGAGCCTCAGGAAGGTCGGCCATTGTATGCCACAGTTCAAAAACTACCAAAACCTGAAAAGAATGACTCGGTAGAGTCCCTTGATCAACTGAGAATTCCTGCATCAtctgatgatgataataatgacaatacCAGTGATGGAGAGTTGCCGCCACCTCTTCCGTCAAGGTTACCAAATCTGGAGGATACCTTAGAAACAACTGAACAATGTGAGAACTCCTTTCATTTTGATAAAGGAGATAAAGTGGAGGAGAAACCTAAAAAGAGTGGGGGCTTTAAactgtttaaaagaaaacacagAAGGCAGATGTCAGATGGAAATGTGGATTTGGAAGCCAGTCCTGCAGGCAGTCCAGTGTTTCAGCATCGTCGATCAAAATCACAGGCAGACGTTATGAACATTGGGGAGAATGGACAAAGTCATATAGACCAATCAGATCCCAAAGCAATGTATTCAGAAATTGATATTCAGCCTGGAAAAATAGAGGTTTCTTCGGACAAGAAGCCACCTGTCAAGCCTTACATGGAAGTTGACATAACACAACCTCCTGTCACCCCTACTGAGTTTAAGGAGGCGAAATTTATGGGAGAGGAGATTGAGGATTACAGTGAACCATATGAATTGCCTGAGGGATGGAGGGAGGTGAATGGTGATAATGGCACTTACTATTGGCATGTTGCTTCTGGCACAACTCAGTGGACCTTACCCCAGGTGGCACCAAGACCAAAGAAAAAAGCAACTGAAGAGGCAAAATCTGCAGAAGCAACAGAAAGgcaaaagGTGCTTAGTTTTCCTGTGCACTCTATGGGTTGGATTGAGCTGGAGGAAAACCAAGTTGCACCGCATAACATGAGCGAAACAATCTCTGACTGCATCTCATCATTGGCACAGCAGCGGAAGGACCTCTGGAACACGTCAGACACCTGGGGAGAGGGGAAGGATATAAGGCTATTGTTGGAAGGAGATGTTCTCAAACTTGCAGAACCAAGAACAAAAGCCACTTTGTTAGTTCAGCCTGTTTCTAAAATGAGAGTGTGGGGTATCGGCAAGGAGGATCAAAGGGATTTCGCATATGTAGCTCGGGATCCCTCAACTGGTAAACACAAGTGTCACATGTTTCGCTGCCATGGCAATATATCTGGTCGTACAATCACCAATGCTTTGCATGACATGTGCAGTAAGATTctggaaaagaagaaaaaggcgCAGGAAAGCAACAGGAAGATGTCAGCACAGAAGCCGTGGTCCGACATTATTAACACCCCTCCGCCATCATCAGCAAGAGATCATGCCAGTTTCAACGAAAAGCCTCATGTGGAACCTAAGAAGAGCTTTTCTGCCAAGTATGTCGGAAGGATTGATGTGCCCAAACCTACAGGTGTGGAGATTCTGAACAAGGCTATTAACAAGCTTACTAGCAAAGGCGGAGTCTGGAAAACCATCCTGATAGAAATTAGTGTTTCAAACATCAGAATAACAGATTGCACGACACAAGAGTTGATTTCGGAAGACAGGGTCCGGTTCATGTCATTCTTTGGTGTTGGCAAGGATGAAAGACTTTGTGGTTACATAGTGTGCACCTCACCAGATGTGTTTCTGTGTCACGTCTTTCACTGCACTCCGAATGCTGCAGCGCTCACCAAGGCATTAGCTGAAGCTTGTCAGCTGCGTTTTCAGAAATGTGTTGATGCCCATCCAGAATTAATGCAGAAAGTAACTGCCTCTGAACaagacaaaataaaagaaaaatcggATAAGGATAAGGCTGGATTTATGACCAGTGTCCAAGGGCTCCTGGGAAAGTTCGGACAAAAGATAGGGGGAGGGAAGAAGgaGGAGAATCAGCCTGACACCAAGTCCTCGCAAAGCAATATTCATGTGATAACTTGTAAACCTACACACACATTTATGGTGAAATACTACGGTGCTCTTCCTGTTGCTGTGGGGACTGGAATCGAAACTGTGGAGGAGGCAGCTAAGcatttgGCAGGTGGAACTCTGCTTGTTTGTCAGTTAGATGTGGCTCTAAATGGTGTAACGCTTTACGACAGTCAGAGAAGCGCTTTGTCGAAGAGAAACTTGGATGCGGATACGATATCATATTGTGGGCTAACAAGTAATAGAAGCCACTTTGGACTCATACAGACTATGGGTGGAGGAAAATATATCTGTCATGTGTTTGCAGAGTACAAGACCAAAGCTGGTCCTATTGTTGCTGCTATTCATGAGACTCTGTGAAGACGAAGCACAGACGGATCAAGGGTTGAACagaatttttaattgtaaagtTGAGTAGATTGTATTGTGCTGCAGCAAGAGAAGCTAACAGATGGGAAGAAACAGACCATTTTCAGGCAGTGTCAAATGACAAAGCCTGACCTATAGGAAATAGAGCAAGAATTTCTAGTCGAAGAGATAACTTGTTCTTATAAGATCAAAAATTAAGCCGTTTACGCAATTATTGGGTGTtttgagttttttgtttttgggggggggtgggtggatTGACGTTAAGGTTTTCATTTTTGACCAGAGAGGAGGGGGTAGAATTGACAAGCATTGAAAAAATGTAGATTAGAAGTACCTCTTTCCACCCTGACACGGTTGTGTTAGTTATGAAAGAAGTAGTGACTGAAAGGATTTAACTTTGAATGAGCTGATGCATATAAATCTTTTTGTTGTTGATGCTCTGCTTCTATAAATAAAAAAGGGTAAATTATTAAATCATTTATTACCTTGTTGATTAAAACGTAGCCTGCTTAGCAGAGGTTTGCTTGATTTCCCTTTGTAGGGAGCTAGAAAGGAAACCTCTGCATGGATCTTCTCGATGCCGTCAAAAATTTTGAACGAATAATAaaactcttaaggacggtgccttctgTTGTTATTGTgcgtacgttctgcgcatttaGAGATACCTGGGTTTCCTTTCGGTGGTGCTAGCTAGTGtaggggtatttttgcgcggtttaaaactatgcggagaaagcaggacttagcaagtgctcttggtatccaacaagaaaatggggggtaaccatgcattatTCAGAAATAATTAAGCGTCATTCTGAAAAAGAACGCTATTCGTtgctttttggatttcaataacacttatttaagatctgcttttcccgcatattcatgaACTGCACAAAataacctttgaattagtaggcaccgtccttaactggtTTCAAACTGGCTATAACCAGTTTGAAATTAACACCTACTCATTGGCGGAAGAGTGGAAGGGACGTGGCTGTGACATCACGACTTGCATGCGTGACAGAACATCGAGGAGATCCTTTCCTTCTCGCTacccattctcgtccccagagccctccgtttttttttggtcacgtggtcggcgAAACGAAAGGCTCTGGTCTCAGCCAGTACCGGACGTCCGTAAATCTCGGATATCCGGCAGAGCATGCGCacttctttcaaatttcaataATCGTGAGTGAGGGGAATAATGGGTGCTCCCTCAGAGGATCATTTCGAAGAAGCGTTTAAAAGGCTTTGATTGCGCTTGTCGGTTACCAAACAACAAAACAGGATGGTTACGATCGAGAATGATCTCGTTGCAGGCGATGCCATTAGGGAACTaaagcaacgagaacgtccataatttgcatatttactgGACTGaaacaacagctttgcacgCCATGCGCGTTCGTGTTTcacttttgtacatttctttgccgtggtctgcaaaacagcaacgtgaaatagccaaattagAGGTTTTATCAAGGACGTCACCACTTGAagacaaattttcattttttccccaaaattaagcgccgttccgaccagtgtcatttttgagaaaCTACCACATCCTTGTCCTATTAAAAAGGTTTAAATAggcacgaagtgattacaataacgcacatttatattttgagatgacgttctcgttgccgtcgccgttgcttaaATTCTCCATTGATTTTCGACGTAGTTGTCATATTTCAGaaacttttttttaatcttttgaaAAGCGCGTCATGTAGGTCGGAAGTAAAATGTAATGCGTAGTACTTGTAATTTTAATCTTTTCTGCGCATACAATTTTAGTCAGCCaatgaaaaatttgaatttttaggtGCGACCAGAACCTTTCGTTTCGCCGACCatgtgaccaaaagaaacggagggccctggggacgagaatgtCTCGCTACCGAAGCAGGATAATTAAAACAGTCATAAGACAAAAAAGAGATTGCACTGAAGCAGAAAGagatcaaggaaaaaaaatggcgaTATTTGTTGAGTTATTCCTTAGTTTTAATTGCAGAAGTTTAATATATGGTGTTaaaaaattttcagaaaaaaaaagaaattcccGAGAAGTGATATTCAGACGGTTTTATATTTGAATTTATTTCAAAgagttatttttgtatttttcttatttggCGTCGTTTTAGATAGGATGTGATGGAGAAGGGcatatataaataattaataactTCTTTGCAGTGAGACAAAGAAAGAATAATCAATGTATTTACTGATTTGCGGAGTGAGTAAGTGATACAATCATTCATCGATCAATCGATTTtgtcaaaagcaaaaattgCGCACGTTGTAAGTGGGTtacaaataattaattactttcTCCGGCGAGGCAGAGATTTCCTTGCTTTCCATATCATCGATGTCGTCCAGAACTAGTATGGACGAATCATTAACTCTTAACCGGTTTCAAACCTGCTATAACCAGTATGACTGTTAACGCCTGCCAATGGCAGAAGAGTGGAAGTGATGTTGCATTGATGTCACATTGCGCATCCGTAACAGAACGTCGAGGAGATCCAAGCATATGTTTCCTTTGCTTCTTGCTAGAGAGGGGAATGAAGGAAATTTCTGCCAAGCAGGGTAGGATGATTGAGGAAAAGaggcatttttttttactttgggAAAGCAAGATGATTTGATTTAATTGGCAATCTCATTAATTATAAGAGCAATTTGTGAGACTTTAATAAAGTTTCAGTCTATTATCAACATTGTTATAGGTATAATTGATTAGTCTGTGCGTGAGAAATGAACCTCTTTCTAAGAAGTCAGGGGCAACCATAAATAATATAACCAATAAAAGATAGAGATTATAATTATGGACTCTTTATAGAGCTTGATagtaaatttaaattttcaatccaCAAAGAAGGTGACTTGCCACTGTGGATGTTTAAAGTGAAAAATTAAAgtaataaaatataaaactatGCAAGTCATGCAATAAATATTGGCAGCCTTCTACCAGCCTCTTTGGAGGTGTCAGAGATATGATATCCTTAATGAATGATTAAAGAAAGGATTGCATTTGAAAAGTTTTGGTAAATTATATTGTCTGAGAGTTTATCGCAACCTTTTAACATTGTATTGACTAAATGCAAAATATAGACTAGGATATAATGCTGCCTTAGTTTAAAAGCGAGAAATTTATATTACTTGGGATGTATATTACTTGTGAGCTATGATTTTCTTATAGGGATTTCAAAAAGGTAATGTAAGTTTTACGCGATTGTAGTGGTTAATAGTGAAGGACTTAATGCAAGCAGGCTGGATCCTGTTTAGTCGAAGTAATGTAAAGGATGTATTTGTGTGAACTTTTAGTCGTAGCTTAGTATTGTACAACTTAAAGTTATGTTCCCATTCAGTGTCTGCTTAGCAtcaattgaaaaataaacatgtttGAATGGTTTGAGCGCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92870	Amyloid beta precursor protein binding family B member 2 OS=Homo sapiens OX=9606 GN=APBB2 PE=1 SV=3
Q9DBR4	Amyloid beta precursor protein binding family B member 2 OS=Mus musculus OX=10090 GN=Apbb2 PE=1 SV=2
Q9BKZ9	Protein Fe65 homolog OS=Caenorhabditis elegans OX=6239 GN=feh-1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003371 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00640 all species →	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR039576 all species →	Family	Amyloid beta precursor protein binding family B member 1/2/3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14058 all species →	AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0001540 all species →	Molecular Function	amyloid-beta binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068720238.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068720238.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

30TPM > 0

1Conditions

52.1Max TPM

19.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	30	19.20	52.12

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	52.12
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	52.05
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	48.88
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	46.93
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	46.45
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	32.88
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	32.53
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	31.82
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	30.45
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	26.48
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	22.59
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	19.80
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	19.59
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	18.99
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	18.46
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	18.22
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	18.11
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	17.03
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	16.92
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	16.40
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	11.97
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	11.67
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	11.52
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	11.23
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	10.75
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	10.12
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	9.78
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	9.49
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	9.34
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	8.62
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.