Gene detail

Detailed information of XP_068723516.1 in Montipora capricornis

Genomic Location: chr10:22660103...22727494
NR annotation: XP_029181546.2, tyrosine-protein kinase BAZ1B-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138020426

ATGCCCCTCTTAGGGAATAAAATTTACAAGCCAAGCCCGCTTCCGAAAGACCTTAAACCCGAGGATGAGGTATTTGTCATCAAAGAGACGAAAGAAGTGTTCAGATCGTATGATGAATATGTCAATCGCATCATTTTGTATGGGTTTCAAGTATGGAGCTGCCAGTTCACTGGAAGAACAAATTTGAAGTATGCTGAAGCTGTAGAAAGTGAAAACCAGGCACTGGAAAGTTTGCAAAGCTTCCCAAAGTATTTTGAGAAACCAGTTCTACAGATTGTCCACCACGGTTCAGAAGGATTACAAGCTCTTGGAGAAAAATGCTCTAAACACCTGGAGAATAAATACTTTGAAGATGAGCTAGTGGAATATCGTGTTGGAGGACAATGGCTTCAAGGCAAAATATCCAGAGTTTATCATAAAAATAAAGATGACATGGGATATGAAATAACTTGTGAGGAAACAACAGATATCAGAAAGAATGTTCTAAAGGAAGACATTAAACGTGTAAAGAAACTGCCATCCGTGGAGATGCTGAAATGTTTTATTAGAGCCAAATCTGAAAACCCATGGTCAAATGATCACAGTCCTTGGGTAGTAAAGGCTGATTTGGTGAAAAAATACTCACTTACAGACAAGTTAAATGACTTTTTCTTAAGTTTTAACAAGAAAACTACTCCCAAGTCCAAGAAGCCTGTTAAAACAATGGCAAGCTCTGAAAAGGGAGAAAAGAAAGTGTTGGATGATAGAACAGGACATGGAAATCCAAAAGTAAACAAGAAAGAACCATCACAAAAAAAGCTTGAATCCTTCACAAAAGGCAGTGTGAAGCATGTATTGGATTCTTTTGATCAACAAACACCATCTGAAAAGGATGTTAAAAGGGCTCCAAGCATATGCATGGGGAAGGGTTATGACCAAACACCATCTGGTAAGCTGCAAGGAACTCCAGTGAAATGTAGACTGGTTCTTACACCTGTTAAATCTCCTTGCACAACATCTAGAAAAAGCCCTGAACAGAAAATTTCCATTACTAAGAAAAAAGTGCCTATCAGAAAAGAAATCACAGTTATATTGGATGACAGTCGTCAGCAAAAATCTGTTGAAAAGCAGAGCAAGTCTTCAAAGAATTTAATTTTGAAATCCAAGAAGTCATTGGAAGGAAAATGGGGTAAAGATGAGGATATACTTTGCAAAGACAAAGCATCTACCAAGCACTCTGCACCTTTGGTAGTAATAGATGGTGGGAGAATGGAAAATGATCGCTGTGTCATGAAAATAGGGTCTTGGAGGGAAGGCAAGTCAGGAAAAGAACAAACAAGCCAATGGACTGATCTTATAGTCCAGGATGATGCTGACGATGTGTTCGAGACTTTTCCCAAGAAGAAAAGAGTCACAACCAGCAAAATGAAGCAGACCACCCTGTTGGACCTGAGCAAAAAGTGTGAGGAGGACGTGAATGACAAGACATCACCAAAGATGAAGTCAAAGAAGCAGAAGACGTTGTCGGAAATGTTCGGTATTTCACAACAGAAAGACAAACCCAATGCAGTGAATACTTTAATGGGGACAACAGCTCAAGTAATCTCCTCTCCAAGAAGCTTGACACTCAATTCACTTACACTGCAACAAGAACATTTGGCTGAGAAATTTATATCAGAGAAAGAAAATTTGAAATGGCAGTCAAATGGAAGACTTGGACAAAAATGTGTACTGAAACAGGATGATGATGATTTGTTGATCTTGAAGCCACTTCCAGCCAAGGCTATAAATCTACCTAGTGGAATTACATTTGAAACATACAGTGATGTCATCATGGTTGCAGAATTTGTTAACCTTTTCCGAGATCTTCTGTCTCCCAAGGAAACTCTGCATATTTCCATAGCTAATTTATCAGATGCCCTGATCACAGGTCCCAAAGGGTTTTCTTTGTTGTCAAAAATATTAGTGGTATTTTTGCAGATCCTGCTTCAAGACAGTTCAACTGAGGGAGAAGAATTAGGTCTGCACCTCTCAGAAGTGCCACTTACACGACAGACAGCATCAGAGGTCTCCCGCTTATATCTTAGCAACAAAATGAAGGGCTCGAGGGCTTATGAAGAATACAAAGAATTTCAGGGAACACTGGAATCTCTTCAGCATCAAGAGTTTTACACTCTCACAGCAGCACAAAAGATTAAGGTTATGGTAACTCTGTGTCATGAGGTACTTTCCTCTGATGCATTTCATGACTACAAGGAAAGACAATCTGCTGAAGCTGCAGAATTAAGGAAAGAGAAGATGGCAAAGCAAAAGGAAAAGAAAGAACAACAGAGAGAAGAAAAAGAGAGGCTAAGAAAAGAGGAAGAGAAAAGCAGAAAGCAACTGACAATGGATGATCTCAGCAAGAAAGATTTTGAAAGTGTGATTGGTTAA

Transcript

rna-XM_068867415.1

GAATTCAAAGGTTCTCTTCAGTGCAGGTAGGGAGACATCTTTGTCAAGATGCCCCTCTTAGGGAATAAAATTTACAAGCCAAGCCCGCTTCCGAAAGACCTTAAACCCGAGGATGAGGTATTTGTCATCAAAGAGACGAAAGAAGTGTTCAGATCGTATGATGAATATGTCAATCGCATCATTTTGTATGGGTTTCAAGTATGGAGCTGCCAGTTCACTGGAAGAACAAATTTGAAGTATGCTGAAGCTGTAGAAAGTGAAAACCAGGCACTGGAAAGTTTGCAAAGCTTCCCAAAGTATTTTGAGAAACCAGTTCTACAGATTGTCCACCACGGTTCAGAAGGATTACAAGCTCTTGGAGAAAAATGCTCTAAACACCTGGAGAATAAATACTTTGAAGATGAGCTAGTGGAATATCGTGTTGGAGGACAATGGCTTCAAGGCAAAATATCCAGAGTTTATCATAAAAATAAAGATGACATGGGATATGAAATAACTTGTGAGGAAACAACAGATATCAGAAAGAATGTTCTAAAGGAAGACATTAAacgTGTAAAGAAACTGCCATCCGTGGAGAtgctgaaatgttttattagaGCCAAATCTGAAAACCCATGGTCAAATGATCACAGTCCTTGGGTAGTAAAGGCTGATTTGGTGAAAAAATACTCACTTACAGACAAGTTAAATGACTTTTTCTTAAGTTTTAACAAGaaaactaCTCCCAAGTCCAAGAAGCCTGTTAAAACAATGGCAAGCTCTGAAAAGGGAGAAAAGAAAGTGTTGGATGATAGAACAGGACATGGAAATCCAAAAGTAAACAAGAAAGAACCATCACAAAAAAAGCTTGAATCCTTCACAAAAGGCAGTGTGAAGCATGTATTGGATTCTTTTGATCAACAAACACCATCTGAAAAGGATGTTAAAAGGGCTCCAAGCATATGCATGGGGAAGGGTTATGACCAAACACCATCTGGTAAGCTGCAAGGAACTCCAGTGAAATGTAGACTGGTTCTTACACCTGTTAAATCTCCTTGCACAACATCTAGAAAAAGCCCTGAACAGAAAATTTCCATTACTAAGAAAAAAGTGCCTATCAGAAAAGAAATCACAGTTATATTGGATGACAGTCGTCAGCAAAAATCTGTTGAAAAGCAGAGCAAGTCTTCAAAGaatttaattttgaaatccaagaagTCATTGGAAGGAAAATGGGGTAAAGATGAGGATATACTTTGCAAAGACAAAGCATCTACCAAGCACTCTGCACCTTTGGTAGTAATAGATGGTGGGAGAATGGAAAATGATCGCTGTGTCATGAAAATAGGGTCTTGGAGGGAAGGCAAGTcaggaaaagaacaaacaagccaATGGACTGATCTTATAGTCCAGGATGATGCTGACGATGTGTTCGAGACTTTTCCCAAGAAGAAAAGAGTCACAACCAGCAAAATGAAGCAGACCACCCTGTTGGACCTGAGCAAAAAGTGTGAGGAGGACGTGAATGACAAGACATCACCAAAGATGAAGTCAAAGAAGCAGAAGACGTTGTCGGAAATGTTCGGTATTTCACAACAGAAAGACAAACCCAATGCAGTGAATACTTTAATGGGGACAACAGCTCAAGTAATCTCCTCTCCAAGAAGCTTGACACTCAATTCACTTACACTGCAACAAGAACATTTGGCTGAGAAATTTATATCagagaaagaaaatttgaaatgGCAGTCAAATGGAAGACTTGGACAAAAATGTGTACTGAAAcaggatgatgatgatttgtTGATCTTGAAGCCACTTCCAGCCAAGGCTATAAATCTACCTAGTGGAATTACATTTGAAACATACAGTGATGTCATCATGGTTGCAGAATTTGTTAACCTTTTCCGAGATCTTCTGTCTCCCAAGGAAACTCTGCATATTTCCATAGctaaTTTATCAGATGCCCTGATCACAGGTCCCAAAGGGTTTTCTTTGTTGTCAAAAATATTAGTGGTATTTTTGCAGATCCTGCTTCAAGACAGTTCAACTGAGGGAGAAGAATTAGGTCTGCACCTCTCAGAAGTGCCACTTACACGACAGACAGCATCAGAGGTCTCCCGCTTATATCTTAGCAACAAAATGAAGGGCTCGAGGGCTTATGAAGAATACAAAGAATTTCAGGGAACACTGGAATCTCTTCAGCATCAAGAGTTTTACACTCTCACAGCAGCACAAAAGATTAAGGTTATGGTAACTCTGTGTCATGAGGTACTTTCCTCTGATGCATTTCATGACTACAAGGAAAGACAATCTGCTGAAGCTGCAGAATTAAGgaaagagaagatggcaaagcaaaaggaaaagaaagaacaacaGAGAGAAGAAAAAGAGAGGCTAAGAAAAGAGGAAGAGAAAAGCAGAAAGCAACTGACAATGGATGATCTCAGCAAGAAAGattttgaaagtgtgattggttaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8DZJ1	Tyrosine-protein kinase BAZ1B OS=Xenopus laevis OX=8355 GN=baz1b PE=2 SV=2
Q9UIG0	Tyrosine-protein kinase BAZ1B OS=Homo sapiens OX=9606 GN=BAZ1B PE=1 SV=2
Q9Z277	Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003139 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15612 all species →	WHIM1	WSTF, HB1, Itc1p, MBD9 motif 1	Motif	Interproscan
PF10537 all species →	WAC_Acf1_DNA_bd	ATP-utilising chromatin assembly and remodelling N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018501 all species →	Domain	DDT domain	Interproscan
IPR013136 all species →	Domain	WSTF/Acf1/Cbp146	Interproscan
IPR047174 all species →	Family	Tyrosine-protein kinase BAZ1B	Interproscan
IPR028942 all species →	Domain	WHIM1 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46802 all species →	TYROSINE-PROTEIN KINASE BAZ1B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006974 all species →	Biological Process	DNA damage response	Interproscan
GO:0035173 all species →	Molecular Function	histone kinase activity	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:0090535 all species →	Cellular Component	WICH complex	Interproscan
GO:0140801 all species →	Molecular Function	histone H2AXY142 kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068723516.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.