Gene detail

Detailed information of XP_068723534.1 in Montipora capricornis

Genomic Location: chr10:54191645...54202331
NR annotation: XP_020623331.1, uncharacterized protein LOC110060862 [Orbicella faveolata]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068867433.1

GCAAGGTAACATGACAAAGGTGAAATGCTTGTGAAATTTTATTGTGCATGTGGAACAAAAAGCGGCCAGAGAGAGTTCGGAGCAGGACCGAGAAGGAAAGTTATGAGCCGGTGGACTCTTCGGTTGGGGATCTGCAAACTACAAAAGTGGCAAATCGTCCTCTTGGGTTTTCTTGTCTTCTCATCGATCGTATATTTCAGGCACAAAGAAAGGTCGGCTGATAAAGAAATACGTTGGCCTTTGCCGTGGGAATTGGGTGGAATGAAATTTCACGCAAAAGATCATAGTGCTGGCATTGAGGGCAAAAGCGCAGTAGGCGGACCTAATACACAAGCTAACATCTTCGATGAACATAAAATGCAACAAGGGAAAGGTTCGTGGATAGAAGGTGTGGTTTCGAAAATGCTTCCTAGGCTTTACTCCAACAGGCAACGTTATAATGAAACGTGTAGTCATAAATGGCAAAGAGAATACAAGAGTCTTCACAAAGATATTTTAGAGGGACGCAGACCGCGAAAGTTTATTGTGTTTACTTGCAAAGAGCAAGAATATGGATGTTCTGGTTATGGTAACCGCTTAGCAGCACTTACGTCGCTTCTCTATCTTTCCATTTTAACCCAACGAGCATTTTTGATTGAATGGGATATGGATGCAGGGGTACCACTCGAACATCACCTTTCTACAAATAACATTGCGTGGAATTATCCTGTCACGGAACTACACGAACTTAAGACGAGGAAGCATCTTTGGGCCAAATACCGCCCAAAAAGAAATGGCACGTTTAACGTAATAGATTCCAAAGCAAAGTTGGCAGCTTGGCTAAAGAAAACCGATTTACAGGCGTTCTTTGACCGCCCCGTTGAAAAGATAATGGGAATGTGGTATTTTGTCGATGTTTTATTGAAAAACGAATTCTTGAAAAATCATGCCATCGAATTGGGGATCAGTTCCAGTGGAACTTATTACAGTTTTATAGGCTGTGCTTTTGAATTTCTCTTTCAAAAGACACGCACATTAGAAGAACGGCTTGAATCAACGCGGAATTCACTTAGTCTTGAAAGATCGGCTTTTAAGATTGGGATACAAGTTAGAATGGGCGACATATCTTTTGGAAAGAGCTTGCCGCATAATGACGTCAATTATAAAGATTTCTTTAATTGCGCTCAGGCGTTAAGTGAAGCAATTTTGACACGAAATCAAACACGTTTCATGGAAAGAAGGATACGATGGTTTCTTGCAACGGACGATATTAAGGTTAAAAAGTTTGCAATCGAGAATTACTCCCCAAATACAGTCACCCAAATGATAACTCCGCAACACATAACACGTTTGACAATGCTGACACGTTCGGAATCCGTGGAAAGTATGTTGGATATAATTGTGGACCATTTATTGTTGTCTGAGTGCACTTTTCTCATTTTGTCCAGAGGAAGTACTTTTGGAAAGACAGCGGCTGCACTCACGTTTCATTCCGCGGAAACGTTGACGTTCGGGACAATATGTGCCCAGATGGCCCGAAATGAGCATAGAAATGAGAACCATAAATGACCTCGAACTCGGGCTATTCCCCCACATACCTCTTCTTCTGTTATTGACCACGTAGTTACAAGCAACAAAGCTAAACGTTGAAAAACTGTTATTGATTGTTGCTATAATCATTTTCGTTCTGGATCCCCTACTTCCAAAcgcttttttgagaaaaagaaaaccaggATTTGGTTGGTCTTGTGACCATGCATGCTTTAAAAGGGCGGTGTCAAAGTATCGCATTTGATTTTGTGTAGTTCCACCAAATActcaaccaagtctctccctcaattgaaggattattcttaattgtcaatttcttccaaatgaagtattatcgttcattttggacactgaaagcttgatagggatcatgggaaatgaacatatttctttttaaagcggaaccctaatgtctggactagcaggactcgaacctgggaacgctTAGTTAATAACCCCTTAACTTAACCActtagactaccacatcactaactgcgaggatgtcatttttaatGGAGGATAATGCTTCATTTAAgacaaagtgacaatgaaggataatccttcatttcaggaagagatcgtgttgaaaTACTCGCCCTTGCTCGCCATCAACATGGTCAACGTTGTGACCGTGCCGACTTGGACACTAGGTAACTGCTAGTCTTGAGGAGTCAACCTCAACCCGAAATCAAATTTTGAGCATGGACTTTACCTACCTGAAATTCTGTTTTAATCCTCTCGGGTTTTCTTTCGATTTTAAGTGTATAACTGAAAAGCTGTTTTGTTTAtacttttattcatttaattcattCCTACGTGATAATTATGTGAAAAGGTGAGAGTCATTTTGAACTGTTCGGATCAATATAAGCTAAGGAACTAGAGGAAGGTGTTCTGCCGACTTGGTCATTCTTTTAAATGAACCTTTCCAAACAGCTAAAAATGGTGTTCAGTGCGCATGTGCAACAGCTGACCGTTTCCCTTTAACGTCAAcctagaaattacttttaaacatcACTACTCAAAGCTTGGTGGCATAAAAATGTCCGTCGAGCATACCGTCATAATTGAAGCTCCAAACAACAAAGATAAACGTTGAAAAACTGCATGTTAGCTGAAATGTTTTCAAACACCCCGTTCGCAACCTATTtcaatcttcttcaattttgcccatccctgcatatttgatgttttattcaaacatCCATTTACTGTTTCAAGTGGTTTAGTGTTTTTTTACGTTTTGCTTGATCCCAGAAGCTGAATGTGGAAAAATCTCGTGACACAGCCCCCACGGTTGAGTTATTCCCAAAGATAAAGAACATTAAGCCGGAAAAGagaatttatttataatttcagttttattttacAACGCCATCATCTCAGCAATAAATAACTCCGATATTGCTTTCCGGCTCCTCCACATCCACAAGAGAATATCTTGCTCTAACTTTCAATACGTGACAAGTGAATACAAAAAGCAAATGGTGGACAAAAAGTAACTTTTCAGGGTTTGATTTGCCACACTTTTTGTGGCATCATCgcgatttatttttatttgtcacgTACAAGCAAGTGCGCtatgttttcaagaaaaacatTCATCGCAAAAGTTcagaaaaaggaacagatagcTACTGCATGCGTTTGCTTTGACTCGTCAAGACAACAAAGCGTCTTGGCCAATCCCACAGAAGTGATAAGAAAAGCAACTACCTTGCTCTTGAAAAATCATTGCTACTTCGACGTGTATTGGAAGGAGGATACTGGCTGTCTGGTAAAAACAACCACCAGCTTTGACGAACGACAATGGAAAATGGAGGGAAAGAGTAAAACAAGTTGCCGAGCTCACTCGACTTGATGATGAAATTCATGAGCAAACCCAGCCTTAACCCCAAGGAAACGTTTAGGGCTGGTTTTTCTTAGCGACACTGCTAACATACCCAAATGGCAGAGCTCGACGTTTTCATTGGTGTCTTTTTTGTCCTTGTGCTACTGAATCATACATGTTCCATACAAGTGAGCTGCATAATAACATTCACAGTGCTTTGGATACACGTCACAATGTGTCACAAGGTGTCCCTTTAAGCTTAAGGACTTCATGATTACCTTTAAGTTATGATTCTGGTTGAGGCCATGGTTCATGGGTCACTTTGTGACGCCCACTCCAAGTAATGTGAATCGGAGAGTGAATTAGACAAGAGTGTCTATCGCTTTGCAGTCtcgccccagcacagtcaccaatggtttatttttagatacactttgcgcgcgaaacaaacaaagggccgccaattttaacaaatcggaagaagccatgtcacacGTAACTGCCTCTGTCAtgtttttcagggacatgacaactgattttcgtgGGAGCGGGTATTCTAAAAGTAgattcatttgtgactgtgctggggagcccacccacgCCAAGAGAACACTctcatctaattcactcttgctgaatctcattatgtcgcTGTATTCGCTATTTCCCCCATCCcgtaatgcaatacgttttgggggatTTAATTAccaaaaaacaatacaagttattcactcttgggactgtatcatgcttcaatGAAATGG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000844 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19745 all species →	FUT8_N_cat	Alpha-(1,6)-fucosyltransferase N- and catalytic domains	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045573 all species →	Domain	Alpha-(1,6)-fucosyltransferase, N- and catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13132 all species →	ALPHA- 1,6 -FUCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0036071 all species →	Biological Process	N-glycan fucosylation	Interproscan
GO:0046921 all species →	Molecular Function	alpha-(1->6)-fucosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068723534.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.