Detailed information of XP_068725091.1 in Montipora capricornis

Genomic Location: chr10:3777616...3793687
NR annotation: XP_044174582.1, alpha-sarcoglycan-like isoform X2 [Acropora millepora]
Species abbreviation MCAPR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005522 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20989
all species →		Sarcoglycan_2_CSarcoglycan alpha/epsilon second domainDomainInterproscan
PF05510
all species →		Sarcoglycan_2Sarcoglycan alpha/epsilon N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919
all species →		Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR048347
all species →		DomainSarcoglycan alpha/epsilon second domainInterproscan
IPR008908
all species →		FamilySarcoglycan alpha/epsilonInterproscan
IPR048346
all species →		DomainSarcoglycan alpha/epsilon, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10132
all species →		ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016012
all species →		Cellular Componentsarcoglycan complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12565SGCA; alpha-sarcoglycan-Viral myocarditisko05416deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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