Gene detail

Detailed information of XP_068727424.1 in Montipora capricornis

Genomic Location: chr11:13584183...13590511
NR annotation: XP_029213273.2, uncharacterized protein LOC114976902 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138024209

ATGGAACGTTGCCCACAAGATGGCACGATGTCATTCAAACAAGGTACACCAACTGATAATGACCTACTTTGCCTTGCTCAAGACTCAGTATCGATCTGGATGAAGCTCGGATTGGCTTTGGGTCTAAGCCAATCTCAATTGGATGAGATAGATGCGGACCAGTCCAAAGTAATAGACAAATCATACAAAATGTTGAGAAAATGGAAAGAATCTCTTGGGGTGACTGCAACTTTTGAAAGGTTAGCTGAGGGACTTGATCACAAGGTCATTAAAAGGCATGACTTGAGAGATGAATACTGCTTAGACAAAGCCTCCAAGTTGACTCAAAGAATGACTGATCTAACTGTTTCAACTGTCTCTGCTGGCGATGATAACTCAAGAGATAAAACTGCGGCAAAGTTCCTTCCCTCTGTCTCGATTCTCCCTGGAAAACCATTTCACGTAACTCAAAGGCGAGGGAGAGAAATACAGAAGATTCGTGAAGCTTTTAGCCAATTGAGACAAAATGCGTCCAATTCTCTCGTAGCAGGGGTGTTCGTTAAAGGGCCACCGGGATGTGGAAAAACCCAGTTAGCAAGACAATTCGGTGAAGAATACATGGACAAAACAGATGATTGCGGGATGGAGTTTCCGCGGCGAAAAATCGTGGCAACACTTAATGCGCGAAGTATTGAGTCGCTCCTTGAATCGTACAGGGAATTACACGAAAAAATGAAAATCCCAAAACGTTTTAAAGAGATAGGAAGCGCACGGGAGCGTGTGCGGGCTTTCGCAGATAGTTTGAAGAGGTATCTGAAGGAAAGTTGCTCTTCGTGGCTGATTATTGTCGATAATCTCACAGTGAACGATCCATTCAGAGAATTTTGGCCAACGCCCGAAGAAAACAGTCCCTGGGGAGAGGGGCTGGTATTAGTAACAACGCAAGATAGCGAACTTGCGCCCAGAGCGCACGCGCAAGCCAGAGTTCTTGGGCTGGACTCTGGAATGGAGGAGGTAGATGCTATGGATCTGCTGAGTGCCGTGTCTGGGATCGCAGGAGATTTGGACGCTAAAAGAGTTGCACAGATGTTGGGTTATTACCCGCTCTCACTTGCTTGCGCGGCTGTTTATGTCCGGCAAATGCGGGAAGACCGACCAGTTTCCAAATTCTCGTGGAAAAATTACATGGCTAATCTCCAGGAATACTTTGCGTATCTTGATCATTCCGATTATACGCATCATAATACATGTTATCCGCAATCCATGCTCCCAGCAGCAGAGTTCGCTGCCCGAAGGATGGCGGAAAACAACGAAGTGCTCCGAGCTGCTTTCGTATTTCTGTCTTACTGTGCTCTTCAGCCAGTGCCCTTAGACAGCATAGCTCAGTACATCTTGAACCAAACGGCAGATACAGACAATGGGAAGATAAGGGTACCAGATGACATCAAGCTCAAAATAGCAAGATGCTCCCTTTTGATTTATCCCGAGACCGGGGAGAGAGGAATCGAGGTTGTAACTCTCCATCAAGTCATGCGATTAGCTTTTTTACAGATAAGACGAAAACAAGACCAGAAAACAGAAACGCCGCACAAATCAGCAGAGAACGCGCTCAAGTCTGAGGAGAGACAAGAGCAAAATGGCATCCTTCAAACTCTTACCCAGGCATACAAGGATAAAAAGGATAGTACTAAAAAGGATGCTATCGCCACGAGGATTATTTTGAGTCCACATATGAAGGAGTTTGTTGACAGAGTAGAGAATCGCCAATTGTTGGAGAGCAGTCTACTGGTACAAACCCTAGTCTACCTCGCGGATAGCCTTGTTCACGTTGCCGGAGCAACGGACAATTCTCGTGTGGCCTTGCTCGAGCGCGCGTACAATATCAACAAACAGCTTGGGCAAGATGACTTAAGCGCTTGTGATTTACTTTGCGACTTGGGGTACACTTATCGCGAGGCGGGCAAGTTGGATAAAGCAATTCCAGTTCTAAAAGAGGCTGAAAAACTCTGCCAGAAGCGCACAGAGCCCGAGTGGATGAAAAAGGGATCCAGAGTACTGAACATTCTCGCGTTTACATATCGTGAAAAGTTCCAACTTGACCTTGCCAAGGAGTACATGGAGAGGTGTGTTGAGGTTACGAAGGAAGCTTTCGGCAAAAACGACGTGCAGGTTGTGGAAAGATTGTGTAATCTTGGAGTGATTTTACAGGACCGCTGGGAAAATGATGAAGCGATAGAAGTACTTGAAGAAGCGAGGAGGATTGTTGAAACATGCGACGTAAGCGAACTCTTCATTCGCGCTCAGGTGTTAAACTATACAGCCAAAGTACATCTCCGCTTGTATCTTGGGTTGCGCTTCACACACCCCCGCGCCATGAATACACGCAAGCATCTCGAGGAATCGGACCACCTGCACGCAGAAGCTTTGAAAATTTACATGGATCTTCATGGAGATCAGCAGAAATTCACGACTGGAGTAATGATGACGTACGGAACAGCCAAACTGCACTTGGGAGACCTCGCGCAGGCGCAAGAGATGTGCGAAAAGGCTGTGGAAGTTTACCGAGGCTCAGGCCATATCGCGTGGCCACGCGCAGGTACGTTTCTCGCGGATATTTTCCTCGCGCGCCAAGACTATCTTCGAGCAAAGAAATTTTTAGAGGAACTTGAACAAGTTCACAAAGATCTCAATCTGGTCGTGAGTCCTGGAGCTTATCATCCCAGGGCGCTTTTAGCCGAGGCATACGGTCATCTTGGGAATGTTGAATCTGCGCTGGAGATCTTGGAGCAGTTACTTGAAGAGTGGAGGAAAAATCGCATGCATCCTGAACACTACTGGGTTGCCCGTGCACGCGCTTTCGTCGAGGAACTCAAGTCGCACGAGGAAGAAGTCGTGGAATATGAACAAGTGCCATCGTTATAA

Transcript

rna-XM_068871323.1

CCAATATTCTCGGAAACGACGCAGTTTGTGGTGAGGACAGGCTTGTGATCGAAGCTCTGTTCATTCAGTGCTCTCAAAACGTTGACTTCAGGAATACCAGAAGGAAACCTTCAAAGGAATACATAGCATGGAACGTTGCCCACAAGATGGCACGATGTCATTCAAACAAGGTACACCAACTGATAATGACCTACTTTGCCTTGCTCAAGACTCAGTATCGATCTGGATGAAGCTCGGATTGGCTTTGGGTCTAAGCCAATCTCAATTGGATGAGATAGATGCGGACCAGTCCAAAGTAATAGACAAATCATACAAAATGTTGAGAAAATGGAAAGAATCTCTTGGGGTGActgcaacttttgaaaggttaGCTGAGGGACTTGATCACAAGGTCATTAAAAGGCATGACTTGAGAGATGAATACTGCTTAGACAAAGCCTCCAAGTTGACTCAAAGAATGACTGATCTAACTGTTTCAACTGTCTCTGCTGGCGATGATAACTCAAGAGATAAAACTGCGGCAAAGTTCCTTCCCTCTGTCTCGATTCTCCCTGGAAAACCATTTCACGTAACTCAAAGGCGAGGGAGAGAAATACAGAAGATTCGTGAAGCTTTTAGCCAATTGAGACAAAATGCGTCCAATTCTCTCGTAGCAGGGGTGTTCGTTAAAGGGCCACCGGGATGTGGAAAAACCCAGTTAGCAAGACAATTCGGTGAAGAATACATGGACAAAACAGATGATTGCGGGATGGAGTTTCCGCGGCGAAAAATCGTGGCAACACTTAATGCGCGAAGTATTGAGTCGCTCCTTGAATCGTACAGGGAATTAcacgaaaaaatgaaaatcccAAAACGTTTTAAAGAGATAGGAAGCGCACGGGAGCGTGTGCGGGCTTTCGCAGATAGTTTGAAGAGGTATCTGAAGGAAAGTTGCTCTTCGTGGCTGATTATTGTCGATAATCTCACAGTGAACGATCCATTCAGAGAATTTTGGCCAACGCCCGAAGAAAACAGTCCCTGGGGAGAGGGGCTGGTATTAGTAACAACGCAAGATAGCGAACTTGCGCCCAGAGCGCACGCGCAAGCCAGAGTTCTTGGGCTGGACTCTGGAATGGAGGAGGTAGATGCTATGGATCTGCTGAGTGCCGTGTCTGGGATCGCAGGAGATTTGGACGCTAAAAGAGTTGCACAGATGTTGGGTTATTACCCGCTCTCACTTGCTTGCGCGGCTGTTTATGTCCGGCAAATGCGGGAAGACCGACCAGTTTCCAAATTCTCGTGGAAAAATTACATGGCTAATCTCCAGGAATACTTTGCGTATCTTGATCATTCCGATTATACGCATCATAATACATGTTATCCGCAATCCATGCTCCCAGCAGCAGAGTTCGCTGCCCGAAGGATGGCGGAAAACAACGAAGTGCTCCGAGCTGCTTTCGTATTTCTGTCTTACTGTGCTCTTCAGCCAGTGCCCTTAGACAGCATAGCTCAGTACATCTTGAACCAAACGGCAGATACAGACAATGGGAAGATAAGGGTACCAGATGACATCAAGCTCAAAATAGCAAGATGCTCCCTTTTGATTTATCCCGAGACCGGGGAGAGAGGAATCGAGGTTGTAACTCTCCATCAAGTCATGCGATTAGCTTTTTTACAGATAAGACGAAAACAAGACCAGAAAACAGAAACGCCGCACAAATCAGCAGAGAACGCGCTCAAGTCTGAGGAGAGACAAGAGCAAAATGGCATCCTTCAAACTCTTACCCAGGCATACAAGGATAAAAAGGATAGTACTAAAAAGGATGCTATCGCCACGAGGATTATTTTGAGTCCACATATGAAGGAGTTTGTTGACAGAGTAGAGAATCGCCAATTGTTGGAGAGCAGTCTACTGGTACAAACCCTAGTCTACCTCGCGGATAGCCTTGTTCACGTTGCCGGAGCAACGGACAATTCTCGTGTGGCCTTGCTCGAGCGCGCGTACAATATCAACAAACAGCTTGGGCAAGATGACTTAAGCGCTTGTGATTTACTTTGCGACTTGGGGTACACTTATCGCGAGGCGGGCAAGTTGGATAAAGCAATTCCAGTTCTAAAAGAGGCTGAAAAACTCTGCCAGAAGCGCACAGAGCCCGAGTGGATGAAAAAGGGATCCAGAGTACTGAACATTCTCGCGTTTACATATCGTGAAAAGTTCCAACTTGACCTTGCCAAGGAGTACATGGAGAGGTGTGTTGAGGTTACGAAGGAAGCTTTCGGCAAAAACGACGTGCAGGTTGTGGAAAGATTGTGTAATCTTGGAGTGATTTTACAGGACCGCTGGGAAAATGATGAAGCGATAGAAGTACTTGAAGAAGCGAGGAGGATTGTTGAAACATGCGACGTAAGCGAACTCTTCATTCGCGCTCAGGTGTTAAACTATACAGCCAAAGTACATCTCCGCTTGTATCTTGGGTTGCGCTTCACACACCCCCGCGCCATGAATACACGCAAGCATCTCGAGGAATCGGACCACCTGCACGCAGAAGCTTTGAAAATTTACATGGATCTTCATGGAGATCAGCAGAAATTCACGACTGGAGTAATGATGACGTACGGAACAGCCAAACTGCACTTGGGAGACCTCGCGCAGGCGCAAGAGATGTGCGAAAAGGCTGTGGAAGTTTACCGAGGCTCAGGCCATATCGCGTGGCCACGCGCAGGTACGTTTCTCGCGGATATTTTCCTCGCGCGCCAAGACTATCTTCGAGCAAAGAAATTTTTAGAGGAACTTGAACAAGTTCACAAAGATCTCAATCTGGTCGTGAGTCCTGGAGCTTATCATCCCAGGGCGCTTTTAGCCGAGGCATACGGTCATCTTGGGAATGTTGAATCTGCGCTGGAGATCTTGGAGCAGTTACTTGAAGAGTGGAGGAAAAATCGCATGCATCCTGAACACTACTGGGTTGCCCGTGCACGCGCTTTCGTCGAGGAACTCAAGTCGCACGAGGAAGAAGTCGTGGAATATGAACAAGTGCCATCGTTATAAGGAGCACGCGCAGTAACAGGGACTCAGCGGAGTTTTTGTCGCTTGATGGGTTGTGTTGCGAAAGAAGAACTGCCCACGTGGAAACAGCACAAACAAAGAGGCACATTAATCAAAAACTTAAAACAAACAGtggctacaaacataatgataaagctcattttacttttaacttgacgtttcgtatgctacaacatacatcttcagaagtgacggttgaacaaataaaatgcgctttatcattatgtttgtagccgccgtttgttttatgtttttgattgagttgaaatggccaaagagcaagaATATATATAAAGGGGCACATCATTGATAAATTAAATTGACGACacgctttcggttcgaccttgctgagctgcgtcgttgctgtacttgcgacggcgattagccgcgacaattatttattattattattattattattattattattattaaagaattTAACAGCCTTGAAAATGAGTGGCAGGTACATTGCCACTCATTTTCCACTTCCTTGATTGGCATAAAAATGCCAATCAAGGAAGTGATTACTATTCTAGCAgatggtttgaacccatgaaTCGTATCAAAACTTGATGACGTAAGAGCGTCCGGATAAGAGCAGTCCTGGGAAGGACTGTTGTTGGTGACATTGATTGACGCCTCGTTACTGACCGGAAGTCATCCCCAGAGTCAAGTGGTTTTCTTGTGGATTGGGAACGAGACACGGATGACAGTCTTGGCAACTAGCCTTATAACGGCTCGACTAGACAGACCGGTAAACATCACGCTTCTATTGACCAATCAGGTCAAAGACCGGAGTACTCATACGATTCACGAACACAAGACACTAAAATTATCTTGACTCTGACGGTGGCTTCCGCTctggttgtcgaaacgtcaatCAAAGTCCACAACAACAGTCATCCTCAGTACTTCTCTCACCCGGATGATCTTACTTCATCACTGAGGTTTTGATGATTACTCTTTTGTAATTCTGGAGGAGATCAGTAATGAAACAGAACATTTCATGAGATGTATTTGTGTGTGATGACTCgggctaaaaaaaattaatgtggacCCCAGCAAGAATCGAACCTGTGCCCCGGCCGCGTTCTTCTACAAGTTGAGACTCGTCACAAGGTTGAACATGATTTACACTGACCAATCACGAAAAGCTCAAATAGCccaattaaccaatcagaattgaaagCGATTGCATGTAACTTGTTCAAAGCGCGGCAAAATAAATGCTGACGCACAAGTCGCGATTTATTTTCCGTAATTTTGCCTTTTATTTGTTGAAAAAAGCCGACCACACCACTAAACCTAGAAATGCAAGATAAACGCTATCGAATTATTATTTTAGACAAAGACATTAAATTGTAAACCGTTCGAAAAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000117 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF17874 all species →	TPR_MalT	MalT-like TPR region	Repeat	Interproscan
PF00531 all species →	Death	Death domain	Domain	Interproscan
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR051476 all species →	Family	Bacterial Response Regulator Aspartate Phosphatase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46630 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN 29	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068727424.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.