Gene detail

Detailed information of XP_068728186.1 in Montipora capricornis

Genomic Location: chr11:4480861...4545277
NR annotation: XP_029200158.2, AP-3 complex subunit delta-1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138024890

ATGTTTGAGAAAAATTTAACAGATCTCGTTCGCGGCATTCGTAACAACAAAAGCAACGAGGCTAAGTACATTGCATCATGCCTGGATGAGATTAAACAGGAATTGAGGCAAGAAAATGCTACTGTCAAGGCCAATGCTGTTGCCAAGCTCACATATCTTCAGATGTTGGGATATGACATCAGCTGGGCAGCATTTAATATCATAGAGGTTATGAGCTCTTCAAAGTTTACTTTGAAGAGAGTTGGTTATCTGGCAGCTTCACAGTCATTTCATGAAGACTTGGATATTCTAATGCTGACCACAAACATGATCAGAAAGGATCTGTGTAGCATGAACATGTATGATGCTGGGGTTTCATTATCTGGATTTTCCTGTTTTGTGACACCAGACTTGGCCAGAGATTTGGCCAATGATGTGATGTCATTGCTTGTATCAACTAAACCTTACATCAGAAAGAGGGCTGTCTTATTAATGTACAAAATATTTCTCAAGTTTCCTGAAGCTCTAAGACCTGCATTTCCAAGACTGAAAGAAAAGCTTGAAGATGCTGAGCCTGGGGTCCAATCTGCTGCTGTAAATGTGATTTGTGAGTTGGCTCGCAAAAACCCAAAGAATTACCTGTCCCTGGCCCCTCTTTTTTTCAAACTGATGACAAGTTCCACCAACAACTGGATGTTAATCAAAATAATTAAGCTATTTGGAGCACTTTGTCCTCTAGAACCAAGGTTAGGAAAGAAATTATTGGAACCATTGACAAACCTGATACACAGTACTTCTGCCATGTCTCTGTTATATGAATGTATAAACACTGTTGTGTCAGGGTTACCCCAGCATACACCTTCTATTCAGCTTTGTGTGAGCAAGCTACGGATTTTAATTGAGGACAGTGACCAAAATTTGAAATATCTTGGTCTGCTTGCTATGTCCAAAATCTTGTCTGTCAATCCAAAAGCTGTTCAGGCACACAAGGATATTGTTCTTCAATGTTTAGATGACAAGGATGAATCCATCAGACTTAGGGCTCTGGATCTTATCGTTGGAATGGTTTCTAAGAAGAATATAATGGATATCATCAAGAAATTAATGGTGCATATAGACAAGGCTGACAGTCAAACATACTGTGATGAGCTAATTTCCAAGATCATCAAGATCTGTAGCATGAATGACTATCACTATGTTACAAATTTTGAATGGTATGTTGATGTACTTATACAGTTGACAAGAGTTGAGGGAACAAGACATGGCAAACTGTTAGCATCACAAATGATGGATGTTACTATCAGAGTAAAGGCTATTCAACCTTATGCTGTGCAGTGCTTTTCATTGTTGCTGGACAATGGTGAGTTGATGTCTGGACCAATGGAAAAGAACAGAGTTTGTGAAGTTCTTTATGCAGCTGCTTGGATAGCAGGAGAATTTTCAGAGCATTTGCCAGATATCAATATCACACTGGCGGCTCTTCTGCATCCCAAAGCAACTTCATTACCAGGCCACATCCAAGCAGTTTATGTCCAGAACATTGCCAAATTATATTCCAAATTATTATTATCCAGTCAAGGAGAGGAAGAGGATACTGACAATACGTCAGTTTGTGAAATGCTGATTGAGAAGTTACCTATCTTTGTGCAAAGTGCTGATCTAGAGGTGCAAGAAAGGGCCAGTTGTGTCTTGCAGCTCATCAAGTATGTGATCAAGTTACAAGGAAAAGGTGTTGATTGCTCAGAAGAAGTAACATCACTATTTCGGGGTGAATTAAACCCAGTGGCTGCTAAAGCACAGAAGAAAGTCCAGGTACCTGAGGGGCTTGACCTTGACAAGTGGATCAACAATCCACCGTCGGAAAGCTCTGAAGAAGAAGAAGAATTGGAAACCTTATTTGATACGCCCAGTGAACACAAAGGTCTGAAACAGAAGCATGAGTCAGAGGATGAGGAGGAAATGAAAAAGAGACGAGAGCAAAGAAAGCAAGATCAGCTGAGTAATCCACATTATCTGAAGATGTCTTCAAAGGGAGATAACCTGGAAAAGAAGAAAGATGTTATGGTTGATGATATTCCAGTGGCCAATATTGAATTACCTGTATCACTCAAGGTGTCAGGAAGTGTGGCTCTTGATAAGAAATACTCATCCAAGAAGACAAAGAGAAGGAGGAAAAGAGGTCGTAAAGGAAGCCAAATGGACGAGGAAGAACCAGATCTTGGAATCTCATATGAAGTTCTCCCAGCTGGTGCAGGAGAATTACCAGAGGGAGCTGATGAGTCAGATCACAATGATAACGAGGAAAAGGTTGATGGTACCTCTGCTGATCCACACAGACTCTTAGATGTCGACCTAAGCAAACCCTTGGAGGCACACGAAGCTCTTCCAGTTCGCCAGCATCGGGTTGTAAATGATAAGCAATCTGATGGTGTTGAAAATGAAGAGGAAACAACACCAAAGAAGCATGGCAAAGATAAAAAGCATAGACACAGGAAAGACAGTGAGAGTAAAAAGGGCAAACGTCAGCATAAATCGAATAAAGAAACAAAAGGCAAAGAAAAGAAACACAAACATCATTCTAAGAGTGAAGAGCCTGCTGCAGAGCACAACCTTATGCTGAATGGCGAAGTCGATCATCTTGAATCTCCTAATAACGAGATAGAAGTGGAATCGCCTCAAAGTCAGACACCAAAAAAGATTACAGAATTAGAGGATTCTAAACCTTTTGTGGATACTCCAAGCGATCCTCAGGATGACATGGAATTCTGGCTTTCTCCAACTCCAGAAAAGAAAACACCACCGAAGCCTACTGAAACACCTAAGACAACTTTACCAAATAATCCAGCTGCTGAAACGCCACCTTCACCATTGCAATCCGAGAAAACAGACGGCAGAGAATCGAAACGAAAACATCGTAAAGATAAATCAGAAACAAAAGAAAAACATGAAAAGGAGAGGAAAAAGGAGAAGAGAAAGAAGAAAATGAGTGATAAGGCTGACACTGCAGAGTCACCTGTTGTTGTTGAACCTGAAAAACAGGATCAACATGGTGAGCAGGATGGTGAGCCTTCAATCATGGAGCTCATCGAGGAAAAGAAACAGCCTGTAATAACAACTTACAAAGTTCTTTCAGAAAGTAGCGCTCTTAGACTGATGTACGAAACAAGAGTGACTCCTCAACATAGAAATCAAGCAGTGGTTTCCATTATTTTTAGTAATTTGACTGATCGTCACATCAAGTCACTGGAATTTAACGTTTTAGACTCTCTCAATACAAAACTGATTAGACCGATCGGTTGTTCCTCCCAAGATAGCGTTCCAGTCCCGTTTCATCTCTTACCAGATTCTTCAAACGAGGGACAGTTTGCTTTCACTGTAGATAGCATTGTAATGTCACAGAAGCTTCGTGGAACTCTCACCTACGTTGTAAAGGATAATGAGGGTTCTACAAGCGAAAAAATGGATTTCTCCGTCTTTTTACCCTGCTCATCATTTCTGATATCCACGCCGCTCTCAAGCGTGGATTTCGCAAACCTTCTAGGAAGCGGGACCTTAGCAAATAAAAGCTCGATTAAGGTTGCAACCCCAGAGACGACGGAATTTAGCACAATAATTACCAAGATTTGTATTCTCCTACATTTTGCAGTTGTGGAACAAGTTGAACTTAGTGCGTCGTTATACGCCATTTCAATACAAGGCCATCATGTTTGCGCTTTAGTCAAACAGTTACCGGATCATTCAGTGACAGTTGACGGCAAAAGCACGGACGCCTCCCTGGTCTCAAATGTGCTCGAAGAAGTCAAATTACTCTTACAATCCCCATAA

Transcript

rna-XM_068872085.1

ggttgaaggtgggcctttaaaattGCCGACTGAATTGTTTGCCAAGGTGCAAGACTGAATTTCGGCTTGCTTCTGCGCTCCGTCCCCACGTGAGCGAGCGGAAGTGCAAATAGAACAATTATTGCCTTActctcccctccctccaggaggtatttttttttctatcccAGAAATCATAGTTACTTTACGCCGCCATGTTGTATGGAACAGGGGAGGATCAACTTTCGTTTACAAAATGCCGTAGCTAAAGTGGTTGACCGTGAAATTACAGAATCCAACCTGGCCTGTGGGTAGTGAAAAGGTTATCGTCCGAAATGTTTGAGAAAAATTTAACAGATCTCGTTCGCGGCATTCGTAACAACAAAAGCAACGAGGCTAAGTACATTGCATCATGCCTGGATGAGATTAAACAGGAATTGAGGCAAGAAAATGCTACTGTCAAGGCCAATGCTGTTGCCAAGCTCACATATCTTCAGATGTTGGGATATGACATCAGCTGGGCAGCATTTAATATCATAGAGGTTATGAGCTCTTCAAAGTTTACTTTGAAGAGAGTTGGTTATCTGGCAGCTTCACAGTCATTTCATGAAGACTTGGATATTCTAATGCTGACCACAAACATGATCAGAAAGGATCTGTGTAGCATGAACATGTATGATGCTGGGGTTTCATTATCTGGATTTTCCTGTTTTGTGACACCAGACTTGGCCAGAGATTTGGCCAATGATGTGATGTCATTGcTTGTATCAACTAAACCTTACATCAGAAAGAGGGCTGTCTTATTAATGTACAAAATATTTCTCAAGTTTCCTGAAGCTCTAAGACCTGCATTTCCAAGACTGAAAGAAAAGCTTGAAGATGCTGAGCCTGGGGTCCAATCTGCTGCTGTAAATGTGATTTGTGAGTTGGCTCGCAAAAACCCAAAGAATTACCTGTCCCTGGCCCCTCTTTTTTTCAAACTGATGACAAGTTCCACCAACAACTGGATGTTAATCAAAATAATTAAGCTAtttggaGCACTTTGTCCTCTAGAACCAAGGTTAGGAAAGAAATTATTGGAACCATTGACAAACCTGATACACAGTACTTCTGCCATGTCTCTGTTATATGAATGTATAAACACTGTTGTGTCAGGGTTACCCCAGCATACACCTTCTATTCAGCTTTGTGTGAGCAAGCTACGGATTTTAATTGAGGACAGTGACCAAAATTtgAAATATCTTGGTCTGCTTGCTATGTCCAAAATCTTGTCTGTCAATCCAAAAGCTGTTCAGGCACACAAggaTATTGTTCTTCAATGTTTAGATGACAAGGATGAATCCATCAGACTTAGGGCTCTGGATCTTATCGTTGGAATGGTTTCTAAGAAGAATATAATGGATATCATCAAGAAATTAATGGTGCATATAGACAAGGCTGACAGTCAAACATACTGTGATGAGCTAATTTCCAAGATCATCAAGATCTGTAGCATGAATGACTATCACTATGTTACAAATTTTGAATGGTATGTTGATGTACTTATACAGTTGACAAGAGTTGAGGGAACAAGACATGGCAAACTGTTAGCATCACAAATGATGGATGTTACTATCAGAGTAAAGGCTATTCAACCTTATGCTGTGCAGTGCTTTtcATTGTTGCTGGACAATGGTGAGTTGATGTCTGGACCAATGGAAAAGAACAGAGTTTGTGAAGTTCTTTATGCAGCTGCTTGGATAGCAGGAGAATTTTCAGAGCATTTGCCAGATATCAATATCACACTGGCGGCTCTTCTGCATCCCAAAGCAACTTCATTACCAGGCCACATCCAAGCAGTTTATGTCCAGAACATTGCCAAATTATAttccaaattattattatccagTCAAGGAGAGgaaGAGGATACTGACAATACGTCAGTTTGTGAAATGCTGATTGAGAAGTTACCTATCTTTGTGCAAAGTGCTGATCTAGAGGTGCAAGAAAGGGCCAGTTGTGTCTTGCAGCTCATCAAGTATGTGATCAAGTTACAAGGAAAAGGTGTTGATTGCTCAGAAGAAGTAACATCACTATTTCGGGGTGAATTAAACCCAGTGGCTGCTAAAGCACAGAAGAAAGTCCAGGTACCTGAGGGGCTTGACCTTGACAAGTGGATCAACAATCCACCGTCGGAAAGctctgaagaagaagaagaattggAAACCTTATTTGATACGCCCAGTGAACACAAAGGTCTGAAACAGAAGCATGAGTCAGAGGATGAGGAGGAAATGAAAAAGaGACGAGAGCAAAGAAAGCAAGATCAGCTGAGTAATCCACATTATCTGAAGATGTCTTCAAAGGGAGATAACCTGgaaaagaagaaagaTGTTATGGTTGATGATATTCCAGTGGCCAATATTGAATTACCTGTATCACTCAAGGTGTCAGGAAGTGTGGCTCTTGATAAGAAATACTCATCCAAGAAGACAAAGAGAAGGAGGAAAAGAGGTCGTAAAGGAAGCCAAATGGACGAGGAAGAACCAGATCTTGGAATCTCATATGAAGTTCTCCCAGCTGGTGCAGGAGAATTACCAGAGGGAGCTGATGAGTCAGATCACAATGATAACGAGGAAAAGGTTGATGGTACCTCTGCTGATCCACACAGACTCTTAGATGTCGACCTAAGCAAaccCTTGGAGGCACACGAAGCTCTTCCAGTTCGCCAGCATCGGGTTGTAAATGATAAGCAATCTGATGGTGTTGAAAATGAAGAGGAAACAACACCAAAGAAGCATGGCAAAGATAAAAAGCATAGACACAGGAAAGACAGTGAGAGTAAAAAGGGCAAACGTCAGCATAAATCGAATAAAGaaacaaaaggcaaagaaaagaaacacaaaCATCATTCTAAGAGTGAAGAGCCTGCTGCAGAGCACAACCTTATGCTGAATGGCGAAGTCGATCATCTTGAATCTCCTAATAACGAGATAGAAGTGGAATCGCCTCAAAGTCAGACACCAAAAAAGATTACAGAATTAGAGGATTCTAAACCTTTTGTGGATACTCCAAGCGATCCTCAGGATGACATGGAATTCTGGCTTTCTCCAACTCCAGAAAAGAAAACACCACCGAAGCCTACTGAAACACCTAAGACAACTTTACCAAATAATCCAGCTGCTGAAACGCCACCTTCACCATTGCAATCCGAGAAAACAGACGGCAGAGAATCGAAACGAAAACATCGTAAAGATAaatcagaaacaaaagaaaaacatgaaaaggagaggaaaaaggagaagagaaagaagaaaatgagTGATAAGGCTGACACTGCAGAGTCACCTGTTGTTGTTGAACCTGAAAAACAGGATCAACATGGTGAGCAGGATGGTGAGCCTTCAATCATGGAGCTCATCGAGGAAAAGAAACAGCCTGTAATAACAACTTACAAAGTTCTTTCAGAAAGTAGCGCTCTTAGACTGATGTACGAAACAAGAGTGACTCCTCAACATAGAAATCAAGCAGTGGTTTCCATTATTTTTAGTAATTTGACTGATCGTCACATCAAGTCACTGGAATTTAACGTTTTAGACTCTCTCAATACAAAACTGATTAGACCGATCGGTTGTTCCTCCCAAGATAGCGTTCCAGTCCCGTTTCATCTCTTACCAGATTCTTCAAACGAGGGACAGTTTGCTTTCACTGTAGATAGCATTGTAATGTCACAGAAGCTTCGTGGAACTCTCACCTACGTTGTAAAGGATAATGAGGGTTCTACAAGCGAAAAAATGGATTTCTCCGTCTTTTTACCCTGCTCATCATTTCTGATATCCACGCCGCTCTCAAGCGTGGATTTCGCAAACCTTCTAGGAAGCGGGACCTTAGCAAATAAAAGCTCGATTAAGGTTGCAACCCCAGAGACGACGGAATTTAGCACAATAATTACCAAGATTTGTATTCTCCTACATTTTGCAGTTGTGGAACAAGTTGAACTTAGTGCGTCGTTATACGCCATTTCAATACAAGGCCATCATGTTTGCGCTTTAGTCAAACAGTTACCGGATCATTCAGTGACAGTTGACGGCAAAAGCACGGACGCCTCCCTGGTCTCAAATGTGCTCGAAGAAGTCAAATTACTCTTACAATCCCCATAAACAAAGCGACTATTATTATTGGCTGGGAATGAATTAATTGAAGGGAACTGAATATAGAGTGGAAAGTGTACCCTTCACCAGACGCGTTTCGAGGCCATCGGCCGGAAGTGGCCATTGGAGTTCCCCCTGACTCCGAAGAGGCATCCTTTTAATTAGAAAATTAGTCAAGGGAAGAAACGACGAACCTGAAGCGAATTTTTtacgttaatttttttcaaattcatcgGTTGATTTTCCTTAATTACAAGAATGTAGGCGTTAGCCGTTGGAAATTATATGTTGGGAGGCAACCTTAACTGCGAGCGCGTCGTACCTCCGAAATCAAACAGCCCAGGGAAAACCATTGaccttttgtaaaaaaaaatgatatgaTGGTAGGCATGCATTTCTTGTTATTCCCTCTTATTACGCATTAACTAGTCCTTCCTGTTGCTTTACAGAAGAACGAACAATTGTTGTGTTTAACTCTCACGTTGTGATGCTCTTGGAAAGGATAAACCAATAGGCTTGCAGCGCTTCTTCTCCTTTTTGGGCTGCAAACTTCCCGTTAGTTTGTATCGTAGGCGAGTTTTAGCACAACACACGCACAGTATTCTCCGCGTAATTTTGGGTTATAATCTTGAATATTTTCAGAGGCAGGGAAAGATTGAAGAGGGACTAAATTGCTACAAAGTTGGTGGGGGTGGACAAATGAGAAAtcatccaatatggcggcccaATGAACCGTCGTGCATCAGCAAGGTATTAAACAGGACGTCTGCTCAGCTCGCTGTCTCTCGCGGGCATAACTCGATATTCGCTCTGCAAAGAATGAACCAATTGTTAaattttgcaagaaaaaaataagtgCCGGCTCAGCCAGCCCGTCCCTCGTTTAAGTAGTCAGACTTAAAAATTTTCAGATCTTCAAAGGCATAATAAGGCCAACTTGTACAGCTTTTGTTGTTTGTACCCTTGGAGAGGCGGACTATTAACTCTTGCAATTCATACTGACACGACATTGGGTCTTCACCAATGGATAGAAAGTGAAAGATGCGAATAATTCGAACGATTCGCAACTACAAGGGACAAAATGTCGGGTCTTAAAATGTAATCGGGTTTTGTTTGGGTGCAACCGTGGATTTCTATAAGGGCTTAGTAGCGTTTGTGCATCTTTGTTGAAATTCTGGCAAACCTAACAGAGTGCTTAATCCATACCAAACGTAAATCCCATTGTAAGTCAaattttattcacaaattcgTGACAGCTTTCTGAGTTATCCATAGAGAGGAAATTTTCCGTCAGCATTAAAGCATTTCTGACGGTAGCCTGAATTTCAGCCGCCTCGCCGCTTGCTAAGTTCACTGACTTAGCGAGCGGAGGAGGCGTTTGAAATTTGAGGGATTCAACGACAAATAAAAGCCACACCGCGTGCCTTGATGCCAAACTGATTTTGTATTTCAGAAATCTATCGAAAAATTAAATGTTAGAATAGCTAGccttaagaaaataaaataattttgtcttgAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q865S1	AP-3 complex subunit delta-1 OS=Bos taurus OX=9913 GN=AP3D1 PE=1 SV=2
O54774	AP-3 complex subunit delta-1 OS=Mus musculus OX=10090 GN=Ap3d1 PE=1 SV=1
O14617	AP-3 complex subunit delta-1 OS=Homo sapiens OX=9606 GN=AP3D1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003931 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06375 all species →	AP3D1	AP-3 complex subunit delta-1	Family	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR010474 all species →	Domain	AP-3 complex subunit delta domain, metazoa	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR017105 all species →	Family	Adaptor protein complex AP-3, delta subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22781 all species →	DELTA ADAPTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0010008 all species →	Cellular Component	endosome membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12396	AP3D; AP-3 complex subunit delta	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068728186.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

30TPM > 0

1Conditions

537.7Max TPM

31.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	30	31.25	537.70

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	537.70
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	46.84
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	46.82
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	38.40
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	38.33
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	34.48
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	31.70
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	31.69
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	30.83
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	29.03
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	27.68
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	19.86
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	14.76
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	14.59
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	14.01
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	13.86
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	13.51
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	12.98
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	12.72
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	12.51
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	12.47
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	12.14
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	11.70
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	11.54
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	11.08
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	10.38
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	8.98
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	8.44
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	7.99
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	7.90
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.