Gene detail

Detailed information of XP_068730150.1 in Montipora capricornis

Genomic Location: chr2:51927017...51943558
NR annotation: XP_015760185.1, PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like [Acropora digitifera]
Species abbreviation MCAPR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068874049.1

TGCGCTATCTCTTTATTTTCGGAGAAGCGATTTGAGTTTTGCGTGTAATCTTCGTTCTGGAACATTCAAACAATTGTATCCTTCTTCATCTTGCCTTGAGTTGAAGATCGTATCAACGGATGACGTGCTTTTACCTGAAAATTGCATTTTTGGATGCAAACTATCTATTTGAATCAGGGCCCGAGACAACTCGCTATTGTTGTCAAATTCGATCAACTCTTCTCTCATATTCGTATTGAGAAAGAGTTAACAACGGCTTATAATGGAGAATATTCCAATCAGGCCGAAATTTTACCTAAACCGTTACCAAACTATCGAAGCTACACCGCCTTCTCGGCTTACCAATAAGTAACAACTTCGAATGGATGATTGCGTTTATATAAGGATTGAGACTGCAAGTCGTTATGGGATTGCAGCAAACTATTGCATTGTGGTCTTGATGAAATCTTCTTGGGGAAGAACTGCTACACCACAGAGGACCTCCTTCTTGGCGAAAAGGGAACTTATACTTGCGCCCTTATTCGGTGCAGCAGCTTGGCTTTACGGCGTCATTTTTATTAATAGAGGAAATGCAAAAAGTGCGAGGGATGTCATGGCTAGGACCGCTCAGGAAGTGGTCGACAAAAAGATTAATCTGTGGATTTTCCCAGAGGGAACTAGAAGTCAGACTGGCACACTTTTACCCTTCAAAAAGGGTGCATTTCATTTAGCCCAGCAAGCACAGCTACCAATTGTGCCACTTGTATTGTATGACTACAGTTctattttcaataaaatgagCAAAACATTTACTACAGGGATCATAAGGGGAAAGGTATTGTCTCCCATATCAACTGAGGGCTTAGCAATAAATGATATTTCTGAACTAACAGAAAGGGTCCGGGAAAAGATGCTCAAAGTCTTCCATGAAAGTGACTATTTAAATGGGACGTCAGCAGATGACAAAAAGACTAACTAATTTCTGCAGTCAGAGTAGGTGTgctttcttgtttcttcacaTCTCCATCCAGTTGTTAGATTAAAACAGGGAAAATCAATCATActcaggcctcggttgttcaaaaggtggataatactaatcacccttcaaacaactggggctgGTGATTAAACAGTTGTGCATGcattgattggttaaaaattgtCTTGAGTTTTACTCTAATTTTCTAGTGAAAAGTAATTTATAGTACTGTGACAGAGTGATTTGGCAGCTGTGCGATTCTTGAAGAAGAATTAagtaaaattgaagaaaatacaGATTCCCTGATAATCACATGAGTAATATTTTTACACGTCAACTCAACCATCATTCCCCTTTGGCTCAGTGGATGTGAATGAATTTTCTTAGGTTATTAACTCAGCCTTTGGTGAATGACAATAAATACAATGTTGTTGACAGTAAAATCCATATGGAAGAATTTCACAGAtaattttttccaaatattCAGATTACTTAACAATATTATATTTGCTGAAGGCGgggtgaataattattgttttagtataattattcaggtgataatttatttgaaaaaattaacatgcattttctttgtctgtcacctCACAAGCAACCAGTCAGTGCAGagaatcacctatgtaattatactaaattattattaataaggtTAAATTAACTTATTTTCTTTAGACTGACATaatgtttttacattttataaGGGGAACAGTGATTGACAAAgtcatattttttaaaatctcttATTTGTTGCACCATTTGCAAGTGGAGTTGCtctgtttttatatttattttgtgtaAATTAAGACCAGATTTTATTTTTGGCAATACTTGTCTAGGCTGTTCCCTTTTTTCTCTATCTACCGTCAAATGCATTTCCTAATTTTGGATTGGTTGGTCtgagtaaaaagaaaaacaagcaaaaacaaaatcagaAGCAGTATGAAATGCAGCCTGAAGCTGCAAATAGAGTCAAGTGTTGGGAGCAGAAAAGAGTAGAGAGTTTAAGCCTGGTTCATGCGTATGacgcaaatgcaaatgcaaattaatgcaAGTGCATTTGCATTTCACATGTGTGACCCGTTGAAAAGCAAACACAAACACAAGGCAAAAAAAAGGGTTCATTCTCATCCTCCATCTTGGAAAGAGGACGTGAACTGCACCTGCATGTCTTACTTCCCTTGCATTTGCATTGGACGTGAGAACTTTgtttgcgtttgcatttgcatCGTACTTGTGAACCAGGCTTCAGTGTTTAAATATTTTCCATGGACATAAAGCTCAATAGCTCCTTCTTTGTTCAATTTGGGGTTGAAGTTGAAATTGAAAATCTGTTCAGCCAAAACCAATGTTTGTACTTTAGATTTAAAAGTTCAAAAATGTTTTACTAAATCATTATCTTCCTCATATCTTATCTTCTCTGTtatctctttttttgaaaactaaaaaatgTGGATTGGTCGGAGGACGATTAATAGAGGAGAAAAAGGGAATTGCCTCACTTTAGTGTGCCCttgtattattttattcaacttgACAACATTTTGGTTGGTGGAGATTTTAGGTTTTCAATTGGATTTTCATACAATCCAAGGAGTAGAATGGTTCTTGTTGCCTGGATATAATTCTTTGGGTGAATATGAAAGTCATTTGCGAATAGGAAGAGTAAGCAAGAACGTTTCAGCTGAAAGTCTGTTTGCCGAACTGCTTTGGACTTTTTCTCTTCTTGTAAAATATCTCTACTAGGTTAAAACATGATTAAGTGGTGTTTTGACCGATGCAATCGTATTCTTTTCTGGTGAAGTCTATCACTGACTCATTCTTAGGGATGTTATTgttctataataattattggatgtagacaactttcataaatggcagtctttattattgttttcgTCCATATTAATTTGATCTACTCATCCAGACTCATCCCATCTTagaacataataataatatagattATTAATATTCTTTTCTCattgtcaaaatatttttttgctcaCCAAAGTAAGGAAATAAAGGCACATTAAGCATTAAGggaaaaaatttgaatttggctgccattatgaaagagtcTGTGGTTTCACAACAAACATCTTGATAAAATGATTTTATGTAAAAAGTTTATTCAGTACAAGATGATTTCATGCTGTGTATTGTAAATAAAGAGAGAGAAGTATTTTTACTCTTATCTAGAGGATTTGCCAGCTGTGTGAGATAAGTACCGGATACTTTCTGCCAGGAATAATGTTAATGTTTGAAGGAGGTGACATTAAAAGCACGTGAATAATGCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99943	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Homo sapiens OX=9606 GN=AGPAT1 PE=1 SV=2
Q95JH2	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Bos taurus OX=9913 GN=AGPAT1 PE=2 SV=1
Q95JH0	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Ovis aries OX=9940 GN=AGPAT1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005816 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01553 all species →	Acyltransferase	Acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002123 all species →	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR004552 all species →	Domain	1-acyl-sn-glycerol-3-phosphate acyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10434 all species →	1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003841 all species →	Molecular Function	1-acylglycerol-3-phosphate O-acyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006654 all species →	Biological Process	phosphatidic acid biosynthetic process	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0008654 all species →	Biological Process	phospholipid biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068730150.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.