Gene detail

Detailed information of XP_068731002.1 in Montipora capricornis

Genomic Location: chr12:18337497...18348259
NR annotation: XP_029201881.1, activator of 90 kDa heat shock protein ATPase homolog 1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95433	Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo sapiens OX=9606 GN=AHSA1 PE=1 SV=1
Q8BK64	Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2
Q8N9S3	Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus musculus OX=10090 GN=Ahsa2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007953 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08327 all species →	AHSA1	Activator of Hsp90 ATPase homolog 1-like protein	Family	Interproscan
PF09229 all species →	Aha1_N	Activator of Hsp90 ATPase, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036338 all species →	Homologous_superfamily	Activator of Hsp90 ATPase, Aha1	Interproscan
IPR015310 all species →	Domain	Activator of Hsp90 ATPase AHSA1-like, N-terminal	Interproscan
IPR013538 all species →	Domain	Activator of Hsp90 ATPase homologue 1-like, C-terminal	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13009 all species →	HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0032781 all species →	Biological Process	positive regulation of ATP-dependent activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26216	AHSA1, AHA1; activator of Hsp90 ATPase protein 1	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068731002.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

31TPM > 0

1Conditions

2,446.8Max TPM

115.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	31	115.33	2,446.77

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	2,446.77
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	97.36
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	91.26
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	88.37
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	83.06
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	70.34
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	68.18
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	67.26
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	64.12
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	62.75
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	62.50
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	61.84
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	61.14
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	60.73
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	58.82
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	58.70
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	55.27
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	54.52
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	50.50
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	50.27
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	49.75
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	45.73
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	44.66
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	43.03
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	43.01
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	41.51
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	37.81
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	36.87
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	36.54
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	31.55
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	27.55
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.