Gene detail

Detailed information of XP_068732013.1 in Montipora capricornis

Genomic Location: chr13:28075674...28103004
NR annotation: XP_029207815.1, multidrug resistance-associated protein 1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138028392

ATGGGTGAAAATGAAAAGACTTTGGTTGTGATAGCAGTCAGTGAACACAAACCCAGAAATGAAAATGACGAGGCAAAAGAAGAAGTGGTTGATGCAGCACCAGATGTGTCTTCACAGTTGGTTGTTAAAAAAGGAGATAAGTTTGATCTGCTTGGTGGAGATTTGGATTGGTGGCTCTACGTAAAAACGTTTGGTGGTGAAGAAAAAGGCTACATTCCCAGCTACTGTGTGGTCCCATTGAAGGATGATCTAACTGATGAACAGCTTAGTGAGATAAATGAGGGTTCAGAACTAACAGCAAGCCTTGTGAATGATGCAGTTGATTTAAAGTTTTTCCCTGATGCACCAGTCAAGAAAGACACAAATACTAGGAAGCCTTGCCCAGAAGATTCGACAAATATATTCTTCAGGATTTCTTTTTGGTGGCTCAACAGGCTCATATTCACAGGTTTCAAGAGGCCATTAACAGATTCTGATTTGTGGGCTCTTAATAAATCTAACAAGGCTGCGACAATAGTCCCACCTTTCATTCAGAAGTGGAAGGAAGCTGAGAGCTTTCTCAGGGGTGTATCCAAATCACAGACAACAGAGCCTGAAGATCTTGAAAAGGCTGAACTGAAAGCAGATGATGCAGATGATCATGAAGAAGTCAAGTTCACTACGAAAGAGAAGAAAGAGAAAAAGAAACCATCACTTTCCAGAATAATGTTTCAAATCTTCCGTGGTCACTTTCTGCTGGCAATCGTTTTAAAATTGGTTTGTGACTGCGTAATGTTTGTGCAGCCACAGCTACTGAGGTTGTTGATTGACTACACTGAGGATAAAAACAACCCAGAAGGAAGATGGCGTGGCTATGTTTTGAGCATCAGTATGTTTGTAGTTGCCTTGATTGAATCAGTAGCTCAACAGCAATACTTTCATGTTATGTTGACTCTTGGACTCAAAGTGAGGACAGCTGTTATAGGAATGGTGTATTCCAAGGCTCTTCTGCTGAATAGCAGTGCACGTAAACAATCTACAGCAGGCGAAATGGTCAACCTGATGTCTGTGGATGCACAGCGATTGATGGATCTTATGGGATATTTGAATACAATTTGGTCCTCTCCTCTCCAAATTGTGGTGTCATTATATTTTTTGTACAACACAATGGGTGTGTCCATCTTGGCAGGTGTGGGAATTATGTTGCTTTTGGTCCCTGCAAACATTATTGTCAGCCGCATAGCACGAAAACTTCAGGTTAAACAGATGGGTGCCAAAGATTTGCGCTTGAAAATGATGAATGAGATTCTTAATGGAATTAAGGTCCTTAAGCTCTATGCTTGGGAAACGTCATTCATTAACAATGTCTTTGAACTTCGACAAAAGGAACTGAAGCATCTGAAGAATGCTTCATACCTAAATGCATTGTTTTCCTTCACTTTCACATGTGCACCATTTTTGGTGTCGATTGCTGCCTTTGCTATTTATGTGATGACTGGTAATGAACTGACAGCTTCCAAAGCATTTGTTGCCATTTCACTCTTCAACATTCTGCGGCTTCCAATGGTTATGCTTCCAAATGTGATAGTCAGCCTAATACAGGCCCAGGTGTCTCTACAACGATTGACTGAGTTCCTGAGTTTGGATGAAATTGATCCAAGTAACACTGAACGAACCATGCCAGAGCACCTTCTTACCCAAGTCATTCATGTTGAAAATGGAACATTCAGCTGGGACAAGAATGACAAACCTACGCTCAAAGACGTCAATATAAATATTCCCGGTGGCTCACTCGTTGCAGTTGTCGGTCAAGTTGGATCTGGCAAATCCACTCTGCTGTCAGCTCTTCTTGGGGAAACAGAAAAACTGCACGGGAATGTCTATGTAAAGGGATCTGTAGCATACGTCCCTCAACAAGCATGGATCCAAAACGCGACACTCAAAGATAATGTTCTGTTTGGAAGACCACTGAATTCCAAACGTTATGCCAAGACAATCCACGCGTGCGCATTACAAACAGATTTGGATATCTTGCCTGGTGGTGATCTGACTGAAATTGGGGAAAAAGGTATTAACCTGAGCGGAGGACAGAAGCAACGGGTCAGTTTAGCTCGTTCTGTGTATTTTGATGCTGATATCTACCTGTTGGATGATCCGCTCAGTGCTGTGGATTCACATGTGGGAAAACACATCTTTGATAAAGTTATTGGTCCCAAGGGAAAGCTTCGAAAGAAGACACGTGTCCTTGTGACTCATGGTATTTCCTTCCTTCGTCAAGTTGATCAGATAATTGTTTTACAAGATGGCAGAATATCAGAGGTTGGAACTTACGAAGAACTGATAAAGAACCAAGGCGCTTTTGCCGAATTTCTGAGTATCTATGCAACTGATCAACAAACAAAGCTCGGAGACACTGTGACAAATGCTGAGGAAACAGATGGACCTTTAAGCCCGGAATTCAGTCTTGAGAAGCTGGATCATAACAGACCTTCTCTGTTGATGCGGGCTGATAGTTTGTCGGTGTATACTGTTGAGACGGCTGAAGTGGAAGGACTGTTAATGAGGTCAGATGAAGAAGAGGTGGCAATGATTGAAGAAGAGACGTCGAAATCTGGAAGGGTGAAGTTTGCCGTGTTCTGGGACTATGCAAAATCTCTGACGATTTTTTTCTTCTCTCTTATCTTGCTTTTCTCCATCATTGGCGAAGGTTCTTCAGTCGCCTCAGGAATCTGGCTGGCAAAATGGAGTTCTACCACAGTCACTTCAGACAGTGAACGTGACAAGTTTCTTGGTGTTTACGGAGGCCTGGGCATGTCACAAGCCGTATTCGTGCTCTGCTCGTCTGTTGCCATGGCATTAGGATCACGTGTTGCTTCGCGCCAGCTTCATCAAAGAATGATGGTCAATATCATGCACGCGCCTATGTCGTTTTTTGAGACCACTCCCCAGGGGAGAATCATGAACCGCTTTTCAAAGGACATAAGCGGGATTGACGATGTCATTCCCAGTACGTTCATGGCCGCTTTGCGAATTTCCCTCCAAGTTTTTGGTGCAATATTTGCCATCACCTATGCGACACCCGTCTTTCTTGCTGTTATTGTTCCGTTAGCTGTGGTGTATGTTTTTGTGCAGAGAATGTATGTATCAAGCTCTCGTCAACTTAAGAGAATTGAATCCGTCAGCCGTTCGCCAATTTACAACAACTTCTTAGAAACAGTCAATGGAACGACCACCATCCGGGCATTTGGTCAACAACAGCGCTTTATCCACGATAATTACTTCATAGTGGATGAAAATCAAGTCGCTTACTACCCTTCAGTGTCAGCGAACAGATGGCTTGCGATTCACTTAGAGTTCCTTGGAAATCTTGTCACTTTTTTTGCGGCTTTGTTTTCTGTGATAAATCGTGATTCCGTGGAAAGTGGACTGGTTGGTTTGTCAGTCGTGTATGCCCTTCAGGTAACTAGCTTTCTGACCTGGATGGTGCGCATGAGCACTGAACTTGAATCCAACATTGTCGCCGTGGAACGAGTCAAGGAATATTCAGAGACACCAAGAGAGGCTGATTGGATCATACCTGACAAGCGACCACCTGATGACTGGCCGGATAGAGGCAGCATCGTAATAGAAGAATTTGACTTGAAGTACAGAGAAGGGTTACCCCTTGTGCTAAAGCAAATCAACTGCGGTGTAAAACCAGGAGAAAAGATCGGTATTGTAGGTCGCACTGGAGCTGGCAAATCCACCTTGACATTAGCCTTATTTCGTATCCTGGAAAGAGCTGGTGGGAGAATTGTCATAGATGGAATGGATATTGCCAAGATTGGACTCCATGATCTGCGATCAAGACTCACCATAATCCCACAGGATCCAGTTTTGTTCTCTGGGACACTACGTCTGAACTTAGATCCGTTTGACAATCATCCCGACGAGGAACTTTGGAAGATTCTTGAATTGAGTCATTTGAAGAACTTTGTGTCGGGACTGGAACAAGGGCTCTTGCATCCAGTGAGTGAAGGGGGAGAGAACTTGAGTGTTGGTCAGCGGCAGTTGGTGTGTTTAGCGCGTGCGCTGCTCCGTAAAAGTAAAGTCCTTGTCCTCGATGAAGCCACGGCCGCGGTGGACCTGGAAACTGATGAGCTCATCCAGCAAACGATACGGCGAGAGTTCGCTGACCGCACAGTGTTTACAATTGCTCACAGGCTCAATACCATTATGGACTATACGAGGATCATGGTCCTGGATAAAGGATTCATGGTAGAATTCGACGCACCTCAGGCCTTGATTGCTAAGAAGGGAATTTTTTATAGCATGGCAGCTGACGCTGGGCTAGCGTGA

Transcript

rna-XM_068875912.1

GAAACCGTCGGAAATTTGCAACATGGTCGAGGTGGTTTGTTTCAAGTTGAACCTTCCTTCATCGTGTCTTAACATCTAAAGTAATAATGCTTAAGTCTTAATTTAAGAAGGAAGtGCATTGAGCTAGGGATGAAACCATAATTCCACTGACATGGGTGAAAATGAAAAGACTTTGGTTGTGATAGCAGTCAGTGAACACAAACCCAGAAATGAAAATGACGAGGCAAAAGAAGAAGTGGTTGATGCAGCACCAGATGTGTCTTCACAGTTGGTTGTTAAAAAAGGAGATAAGTTTGATCTGCTTGGTGGAGATTTGGATTGGTGGCTCTACGTAAAAACGTTTGGTGGTGAAGAAAAAGGCTACATTCCCAGCTACTGTGTGGTCCCATTGAAGGATGATCTAACTGATGAACAGCTTAGTGAGATAAATGAGGGTTCAGAACTAACAGCAAGCCTTGTGAATGATGCAGTTGATTTAAAGTTTTTCCCTGATGCACCAGTCAAGAAAGACACAAATACTAGGAAGCCTTGCCCAGAAGATTCGACAAATATATTCTTCAGGATTTCTTTTTGGTGGCTCAACAGGCTCATATTCACAGGTTTCAAGAGGCCATTAACAGATTCTGATTTGTGGGCTCTTAATAAATCTAACAAGGCTGCGACAATAGTCCCACCTTTCATTCAGAAGTGGAAGGAAGCTGAGAGCTTTCTCAGGGGTGTATCCAAATCACAGACAACAGAGCCTGAAGATCTTGAAAAGGCTGAACTGAAAGCAGATGATGCAGATGATCATGAAGAAGTCAAGTTCACTacgaaagagaagaaagagaaaaagaaaccatCACTTTCCAGAATAATGTTTCAAATCTTCCGTGGTCACTTTCTGCTGGCAATCGTTTTAAAATTGGTTTGTGACTGCGTAATGTTTGTGCAGCCACAGCTACTGAGGTTGTTGATTGACTACACTGAGGATAAAAACAACCCAGAAGGAAGATGGCGTGGCTATGTTTTGAGCATCAGTATGTTTGTAGTTGCCTTGATTGAATCAGTAGCTCAACAGCAATACTTTCATGTTATGTTGACTCTTGGACTCAAAGTGAGGACAGCTGTTATAGGAATGGTGTATTCCAAGGCTCTTCTGCTGAATAGCAGTGCACGTAAACAATCTACAGCAGGCGAAATGGTCAACCTGATGTCTGTGGATGCACAGCGATTGATGGATCTTATGGGATATTTGAATACAATTTGGTCCTCTCCTCTCCAAATTGTGGTGTCATTATATTTTTTGTACAACACAATGGGTGTGTCCATCTTGGCAGGTGTGGGAATTATGTTGCTTTTGGTCCCTGCAAACATTATTGTCAGCCGCATAGCACGAAAACTTCAGgTTAAACAGATGGGTGCCAAAGATTTGCgcttgaaaatgatgaatgaGATTCTTAATGGAATTAAGGTCCTTAAGCTCTATGCTTGGGAAACGTCATTCATTAACAATGTCTTTGAACTTCGACAAAAGGAACTGAAGCATCTGAAGAATGCTTCATACCTAAATGCATTGTTTTCCTTCACTTTCACATGTGCACCATTTTTGGTGTCGATTGCTGCCTTTGCTATTTATGTGATGACTGGTAATGAACTGACAGCTTCCAAAGCATTTGTTGCCATTTCACTCTTCAACATTCTGCGGCTTCCAATGGTTATGCTTCCAAATGTGATAGTCAGCCTAATACAGGCCCAGGTGTCTCTACAACGATTGACTGAGTTCCTGAGTTTGGATGAAATTGATCCAAGTAACACTGAACGAACCATGCCAGAGCACCTTCTTACCCAAGTCATTCATGTTGAAAATGGAACATTCAGCTGGGACAAGAATGACAAACCTACGCTCAAAGACGTCAATATAAATATTCCCGGTGGCTCACTCGTTGCAGTTGTCGGTCAAGTTGGATCTGGCAAATCCACTCTGCTGTCAGCTCTTCTTGGGGAAACAGAAAAACTGCACGGGAATGTCTatgtaaagGGATCTGTAGCATACGTCCCTCAACAAGCATGGATCCAAAACGCGACACTCAAAGATAATGTTCTGTTTGGAAGACCACTGAATTCCAAACGTTATGCCAAGACAATCCACGCGTGCGCATTACAAACAGATTTGGATATCTTGCCTGGTGGTGATCTGACTGAAATTGGGGAAAAAGGTATTAACCTGAGCGGAGGACAGAAGCAACGGGTCAGTTTAGCTCGTTCTGTGTATTTTGATGCTGATATCTACCTGTTGGATGATCCGCTCAGTGCTGTGGATTCACATGTGGGAAAACACATCTTTGATAAAGTTATTGGTCCCAAGGGAAAGCTTCGAAAGAAGaCACGTGTCCTTGTGACTCATGGTATTTCCTTCCTTCGTCAAGTTGATCAGATAATTGTTTTACAAGATGGCAGAATATCAGAGGTTGGAACTTACGAAGAACTGATAAAGAACCAAGGCGCTTTTGCCGAATTTCTGAGTATCTATGCAACTGATCAACAAACAAAGCTCGGAGACACTGTGACAAATGCTGAGGAAACAGATGGACCTTTAAGCCCGGAATTCAGTCTTGAGAAGCTGGATCATAACAGACCTTCTCTGTTGATGCGGGCTGATAGTTTGTCGGTGTATACTGTTGAGACGGCTGAAGTGGAAGGACTGTTAATGAGGTCAGATGAAGAAGAGGTGGCAATGATTGAAGAAGAGACGTCGAAATCTGGAAGGGTGAAGTTTGCCGTGTTCTGGGACTATGCAAAATCTCTGacgatttttttcttctctcttatCTTGCTTTTCTCCATCATTGGCGAAGGTTCTTCAGTCGCCTCAGGAATCTGGCTGGCAAAATGGAGTTCTACCACAGTCACTTCAGACAGTGAACGTGACAAGTTTCTTGGTGTTTACGGAGGCCTGGGCATGTCACAAGCCGTATTCGTGCTCTGCTCGTCTGTTGCCATGGCATTAGGATCACGTGTTGCTTCGCGCCAGCTTCATCAAAGAATGATGGTCAATATCATGCACGCGCCTATGTCGTTTTTTGAGACCACTCCCCAGGGGAGAATCATGAACCGCTTTTCAAAGGACATAAGCGGGATTGACGATGTCATTCCCAGTACGTTCATGGCCGCTTTGCGAATTTCCCTCCAAGTTTTTGGTGCAATATTTGCCATCACCTATGCGACACCCGTCTTTCTTGCTGTTATTGTTCCGTTAGCTGTGGTGTATGTTTTTGTGCAGAGAATGTATGTATCAAGCTCTCGTCAACTTAAGAGAATTGAATCCGTCAGCCGTTCGCCAATTTACAACAACTTCTTAGAAACAGTCAATGGAACGACCACCATCCGGGCATTTGGTCAACAACAGCGCTTTATCCACGATAATTACTTCATAGTGGATGAAAATCAAGTCGCTTACTACCCTTCAGTGTCAGCGAACAGATGGCTTGCGATTCACTTAGAGTTCCTTGGAAATCTTGTCACTTTTTTTGCGGCTTTGTTTTCTGTGATAAATCGTGATTCCGTGGAAAGTGGACTGGTTGGTTTGTCAGTCGTGTATGCCCTTCAGGTAACTAGCTTTCTGACCTGGATGGTGCGCATGAGCACTGAACTTGAATCCAACATTGTCGCCGTGGAACGAGTCAAGGAATATTCAGAGACACCAAGAGAGGCTGATTGGATCATACCTGACAAGCGACCACCTGATGACTGGCCGGATAGAGGCAGCATCGTAATAGAAGAATTTGACTTGAAGTACAGAGAAGGGTTACCCCTTGTGCTAAAGCAAATCAACTGCGGTGTAAAACCAGGAGAAAAGATCGGTATTGTAGGTCGCACTGGAGCTGGCAAATCCACCTTGACATTAGCCTTATTTCGTATCCTGGAAAGAGCTGGTGGGAGAATTGTCATAGATGGAATGGATATTGCCAAGATTGGACTCCATGATCTGCGATCAAGACTCACCATAATCCCACAGGATCCAGTTTTGTTCTCTGGGACACTACGTCTGAACTTAGATCCGTTTGACAATCATCCCGACGAGGAACTTTGGAAGATTCTTGAATTGAGTCATTTGAAGAACTTTGTGTCGGGACTGGAACAAGGGCTCTTGCATCCAGTGAGTGAAGGGGGAGAGAACTTGAGTGTTGGTCAGCGGCAGTTGGTGTGTTTAGCGCGTGCGCTGCTCCGTAAAAGTAAAGTCCTTGTCCTCGATGAAGCCACGGCCGCGGTGGACCTGGAAACTGATGAGCTCATCCAGCAAACGATACGGCGAGAGTTCGCTGACCGCACAGTGTTTACAATTGCTCACAGGCTCAATACCATTATGGACTATACGAGGATCATGGTCCTGGATAAAGGATTCATGGTAGAATTCGACGCACCTCAGGCCTTGATTGCTAAGAAGGGAATTTTTTATAGCATGGCAGCTGACGCTGGGCTAGCGTGACTACTGTCACTTTTTGCGTAACAATTTACTGACTGCTGCAACACGTATACACATCACTTCATGTCGTTCGTGACCCAAACTCTTGTTTGTCGGTTGAAAAAATATGccgctggtcacgtgagtgaagtCACTCCATACAAACCTTTCCGAAATGAAGTacaaaatatttgcttttcAATGCATATGTAGTAAATCGGACATAAATAGGTAACAATTACGTCAAGAAGATTACCTTTTCTTCTGAATAGCTTTATCGTATGAAAGAAATGGAATTTGAGTTCGTGTTCTTCAAGCTTTATCTTCACACTCCATCTCCAATCCTTGGTGTTTGTTTGCCATGGTATCTATTGTTGTTTACTATTATCCACAAATCCCCGAAAATTTCAAATAGAGTGTTCATAGTAAGTAATGTTTCGTTTGCTCAACCGGGAATTTAcgaattttcaaaatcacttgaAAATATCCAACGGGACTTTCCGAAAGGAAAGTACTTGTTCCATGTGCTTCCCGAGTCTCTCTAACTAGGTTTGAGACAATTCTGCAAATGGAACATGCCAGTCCTTATGGAGTTTCCCAtttgggaatttttttctttgcctttgaACAAACTACATGCTTTACGCTTGTAATGTTTTTAGGGAATAACTACCCCCAGACTCCTTTTGTGCTCAACTGTATTGGGCGAAATGAGTGAATTATTTCGCTCTGTATAATAATGTCCTCTTGTTTAGGTACTAGACTCTCTTTGAACACGTTTTAGTAATTAATCCAGTATTAGGCGTTTAGTTATATTAGGAGATTTTATTGGAAATCACTTCTAACGTTTATACGCCTTCTGGTGTGAGCAAATTAGCTGGAATAAGACGATGTTCATGGAAATTTATCCTTTCACTCCCACGATCGAAAAGTTAATTCTCCAAACAATACCATAGCTTTCTTTACTGACTGGGAATGAGAATTTGGTGATATGTCAAGATAATGGTCCTAACTTATAATaattttcattctcaatacctctCTACCTGACAGTATGTTGAAAtcgtgaggagaatttacattcTGATCCTTCCTggaagtcaaagggttaacaaacAGTATCCTGCCTGTCAGTCGTTCTCATAATATCAAACTATTCGTGAACATATTTTTAGAAATTTTTAATATTCACGCTCTGGCGAGCAGGCTCACTAGTTTGTCTGTCCGTAAATAAATCGTGGGACCAGATTTCCACCTCATAGCAATGCCATGCGTTTTTAGtctttaaatttatttgtattctaattttttaaaattattttatggcTTCGTTACAAATTACATCTCTGTGAAACTATGCGCCTTTTAAGAAATGAACATTGCGAAATtgaattttgctgttttttttatttgcggTATGCTGACcgaatttaaaaaaaggaacgCCAATAAACTGTTGTTTTATCTTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F364	Multidrug resistance-associated protein 1 OS=Gallus gallus OX=9031 GN=ABCC1 PE=2 SV=1
Q8HXQ5	Multidrug resistance-associated protein 1 OS=Bos taurus OX=9913 GN=ABCC1 PE=1 SV=1
Q6UR05	Multidrug resistance-associated protein 1 OS=Canis lupus familiaris OX=9615 GN=ABCC1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000027 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR050173 all species →	Family	ATP-binding cassette transporter C	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005292 all species →	Family	Multi drug resistance-associated protein	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24223 all species →	ATP-BINDING CASSETTE SUB-FAMILY C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068732013.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068732013.1 across 36 RNA-seq samples of Montipora capricornis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

0TPM > 0

1Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.