Detailed information of XP_068732033.1 in Montipora capricornis

Genomic Location: chr13:40740555...40824810
NR annotation: XP_044179980.1, GRIP and coiled-coil domain-containing protein 2-like isoform X4 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IWJ2GRIP and coiled-coil domain-containing protein 2 OS=Homo sapiens OX=9606 GN=GCC2 PE=1 SV=4
Q8CHG3GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=3
D3ZZL9GRIP and coiled-coil domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Gcc2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001843 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01465
all species →
GRIPGRIP domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000237
all species →
DomainGRIP domainInterproscan
IPR051841
all species →
FamilyMicrotubule and Golgi organization proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18902
all species →
NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for XP_068732033.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20282GCC2; GRIP and coiled-coil domain-containing protein 2-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068732033.1 across 36 RNA-seq samples of Montipora capricornis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples
0TPM > 0
1Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Polyps 36 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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