Gene detail

Detailed information of XP_068732041.1 in Montipora capricornis

Genomic Location: chr2:56991068...56995824
NR annotation: XP_027043217.1, V-type proton ATPase subunit G-like [Pocillopora damicornis]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BMC1	V-type proton ATPase subunit G 3 OS=Mus musculus OX=10090 GN=Atp6v1g3 PE=1 SV=1
Q25532	V-type proton ATPase subunit G OS=Manduca sexta OX=7130 PE=3 SV=1
Q9CR51	V-type proton ATPase subunit G 1 OS=Mus musculus OX=10090 GN=Atp6v1g1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008876 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03179 all species →	V-ATPase_G	Vacuolar (H+)-ATPase G subunit	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005124 all species →	Family	Vacuolar (H+)-ATPase G subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12713 all species →	VACUOLAR ATP SYNTHASE SUBUNIT G	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016471 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase complex	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02152	ATPeV1G, ATP6G; V-type H+-transporting ATPase subunit G	-	Rheumatoid arthritis	ko05323	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068732041.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

30TPM > 0

1Conditions

220.0Max TPM

137.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	30	137.45	219.99

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	219.99
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	210.98
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	208.58
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	204.24
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	201.81
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	201.01
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	178.97
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	177.63
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	176.31
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	170.53
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	169.05
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	168.20
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	166.49
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	161.91
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	161.00
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	160.20
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	158.76
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	156.21
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	150.88
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	149.24
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	147.11
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	146.17
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	145.83
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	142.13
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	141.83
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	141.40
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	140.70
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	139.84
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	125.76
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	125.47
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.