Gene detail

Detailed information of XP_068733755.1 in Montipora capricornis

Genomic Location: chr13:37582195...37601630
NR annotation: XP_029181164.2, elongation factor G, mitochondrial-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068877654.1

CCCCAATTGTGGTCCTCGGGCAGCATTCAGGATTCTCTAGAACATCATCATATCTTTCACTTTTCTCCACAGAATGACATTGCGCAATTTTCTAAGGCAATCAATCGCTTCCCACGAGAAGATCCTACCTTCAGAGTTGGATACGACGACGAAAGCAGAGAGACTATCAATTCGGGAATGGGAGAGCTTCATCTGGACATTTATACAGAGTTTTGACTACCTTCACAAGAAACAGACCGGTGGTGCAGGGGAGTTTGGTCGTGTCATCGGCCGAATAGAGCCGATGCCCGAAGATAAAATCACAGAGATCGACTTTGTGGACGCCACAGTGGGCATGAATATCCCCAAGAACTTCATTCCCTCGATAGAGAAGGGTTTCCAAGAGGTCTGCGAACGCGGTCTTATCACGGGTCACAAGTTGGCAGGAATTCGTTTCATCCTTGAAGACGGAGCTGCCCACGGAGTTGATTCAAGTGAACTTGCCTTCAAGTTAGCTGCCATTGGAGCTACCATGAGAGAAGCTTTCCCGAAAGCCACCCCTCTTATTTTGGAACCGATCATGTCAGTCGAAGTCAACATTCCTCAAGAGTTTCAGGGTGCTGTCATAGGTGGACTAAACCGCAGGCACGGTATGATCACCGGCACAGACGCTGCGGAAGGATACGTCACAATCTACGCTGATGTCCCTCTTAATGACATGTTCGGATATTCGACAGAGTTACGATCTCAGACACAGGGCAAAGGAGAATTTGCAATGGAATACAGCAGATACATGGCCGCATCGCAGCAAGTGCAAGCGGAACTCATGGAGAAATTCGATCTAGAAAGACTCAAAAAGGCCAAATCAAGATAACGAAAGATCTCTGTCTCTCTTCATAGAAGAATTAGTCACGAAATCCTGGTAACGCTTTCTGCTTTTGTTGGTGAGCTTTGAATGTCGCTCAACGCCTTGTCACACAAACTCTTAAGCGAAAAGGTAGTGCCACTTGTTTCGAGGATGTGGATGTCCatgttttgatggtttttcgTGGAATGGACTACCATGCATCTTTCAACAATTCCAAGGGCATGTCCTATTCGAAGGATTGACTCTAGAATACTGTTTCACGTGTTGGTAATGTTGTGGtaacaaacgaaacaaaaataattgcttaacaagttGCACTCCGTAATGGGACTTTaaaggttaccatagcaacaataGAATAATCTTAAAACACtttatattttgtctttgaacgattatatctcaaaaacgaaagCATTGCCCCCATTTGTTGTTGCCGAAAGTGAGTAGCAAGCTAAGATTAAACTCTCTGCGaattaacaacaaaaatctGGATCggtttagagccaccttaaaattttacAATTGTTACCTGAAACAGTTGTGTTGCCTGCATAGCTGGCGGTTTTGTTGGCACGAGAGGCAAAGTAACGATCGgcgaagccgcgcggagaatggggagggtgcttctccccattctccgcgcaaACACTACCGCCAGTACCCTggataccagaggtttttttctcGCGCGCGGCACACGGAAATTCGGCAGATTAGTCTGGGTTCctgaaaatgttaaaactgGCTTAAGCATCTTACGAGCAATCACAGTTTTATGACTCAATTTTTGGAgaacttagttttttttttaattgttcgtTGCTCTGACAACTGATGGGTTTTCTCACTGTGCGTTTACTGTTTCTATTTCATCGTAAGAGCAAGAACAGTGAGGAGAATAAGAGAGATGAAATATATGCAAACCTGACAATATTTGTTTGCGCATTGCTTGTCTTAGGGCCAGCTAACTATTATTTCGGAACCTCGATGGAACTCCACTTGCCATTTGCGGGTCGCTTACTGTAGGGTCCAGAAGTTAACTGATAAACAGACAACTAAATGACAAAGCAATTTAGTAATTTCTGCGGTGATACAAAATGCGCAACTTTCCTGAATCTACTCTTAATAAACTTGATAATCCTATTTGTTACCCTTATCTGCTCAAATAGTTTTCTTCCATTAATGGTAAATTATTAGTCACCAAATGTAATTTTCGTTTCGTCTTTGAATGAGGAACTcatcactattttttttttttttacaataacacaGAAAACATTCTCGGAACGAGGAACAAGTGGTTTAAGAAAACAGAGTTAACCGCTACATCTTAGGGAAATTCGGAACATTCCTTGATCGGcaaatagcgatgtttctcatTTTTCCATCATTTTTAATCCGTAGCAAGGTAGTAATTTTGATTTGGTTTGTCCGACCGCAAACTATTCGGCAAACAGCTGCTGATAACCGAACAggtcacggagcttgggtccgaggtcaaattaactccacccggtGAGGTACAGttatttcatgtacaacacttaccccatccccactcggacagcggc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7RR04	Elongation factor G, mitochondrial OS=Nematostella vectensis OX=45351 GN=v1g236547 PE=3 SV=1
Q08BB1	Elongation factor G, mitochondrial OS=Danio rerio OX=7955 GN=gfm1 PE=2 SV=1
B4KKD5	Elongation factor G, mitochondrial OS=Drosophila mojavensis OX=7230 GN=mEFG1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001970 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF03764 all species →	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR047872 all species →	Domain	Elongation factor G, domain IV	Interproscan
IPR005517 all species →	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43636 all species →	ELONGATION FACTOR G, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0070125 all species →	Biological Process	mitochondrial translational elongation	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068733755.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.